RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 PCBP2Q15366 365 aaKnown RBP eCLIP10.78□□□□□ -0.68
BEST1-201ENST00000378043 AASDHQ4L235 1098 aaPredicted RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 LRRC23Q53EV4 343 aaPredicted RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 ADGRF1Q5T601 910 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 GLYATQ6IB77 296 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 CYP20A1Q6UW02 462 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 GPR141Q7Z602 305 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 RNF180Q86T96 592 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 CLVS1Q8IUQ0 354 aaPredicted RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 DHRSXQ8N5I4 330 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 DRAXINQ8NBI3 349 aaPredicted RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 FBXO22Q8NEZ5 403 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 DBF4BQ8NFT6 615 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 FAM81AQ8TBF8 368 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 PDLIM5Q96HC4 596 aaKnown RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 RNF145Q96MT1 663 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 NSUN3Q9H649 340 aaKnown RBP10.78□□□□□ -0.68
BEST1-201ENST00000378043 C8orf4Q9NR00 106 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 TMEM45AQ9NWC5 275 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 NUDT4Q9NZJ9 180 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 PCDHB9Q9Y5E1 797 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 PCDHB3Q9Y5E6 796 aa10.78□□□□□ -0.68
BEST1-201ENST00000378043 SCN8AQ9UQD0 1980 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 KANSL1LA0AUZ9 987 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 ARNTLO00327 626 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 GAPDHSO14556 408 aaPredicted RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 COL6A1P12109 1028 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 TCF3P15923 654 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 MZF1P28698 734 aaPredicted RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 TRAF3Q13114 568 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 PMS2P3Q13401 168 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 TCTN1Q2MV58 587 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 HECTD3Q5T447 861 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 CHST9Q7L1S5 443 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 LYSMD3Q7Z3D4 306 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 GPR180Q86V85 440 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 C12orf43Q96C57 262 aaKnown RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 VPS50Q96JG6 964 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 GLT1D1Q96MS3 346 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 CDK5RAP1Q96SZ6 601 aaKnown RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 TTPALQ9BTX7 342 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 NMRK2Q9NPI5 230 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 PFDN4Q9NQP4 134 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 MAGED1Q9Y5V3 778 aaPredicted RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 GRXCR2A6NFK2 248 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 SCAMP3O14828 347 aaKnown RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 KATNA1O75449 491 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 PRSS23O95084 383 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 ALPIP09923 528 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 YAP1P46937 504 aaKnown RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 STT3AP46977 705 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 PLIN5Q00G26 463 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 TWF1Q12792 350 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 GTF2H2Q13888 395 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 PLCL1Q15111 1095 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 AP5B1Q2VPB7 878 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 TMEM214Q6NUQ4 689 aaKnown RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 GTF2H2CQ6P1K8 395 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 DHRS4L2Q6PKH6 230 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 ABRAXAS1Q6UWZ7 409 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 ANKS3Q6ZW76 656 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 CHST15Q7LFX5 561 aaPredicted RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 PROSER1Q86XN7 944 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 CRIPAKQ8N1N5 446 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 LKAAEAR1Q8TD35 194 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 C2orf15Q8WU43 125 aaKnown RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 CGREF1Q99674 301 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 BOCQ9BWV1 1114 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 ELAC1Q9H777 363 aaKnown RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 CARS2Q9HA77 564 aaKnown RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 ELOVL2Q9NXB9 296 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 VAPAQ9P0L0 249 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 EVLQ9UI08 416 aaPredicted RBP10.77□□□□□ -0.69
BEST1-201ENST00000378043 PCDHB7Q9Y5E2 793 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 COMMD10Q9Y6G5 202 aa10.77□□□□□ -0.69
BEST1-201ENST00000378043 PRMT5O14744 637 aaPredicted RBP10.76□□□□□ -0.69
BEST1-201ENST00000378043 PFDN6O15212 129 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 TAPBPO15533 448 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 FFAR2O15552 330 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 IRF1P10914 325 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 CTPS1P17812 591 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 HMGCLP35914 325 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 ARL1P40616 181 aaPredicted RBP10.76□□□□□ -0.69
BEST1-201ENST00000378043 TM4SF4P48230 202 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 DCTN2Q13561 401 aaKnown RBP10.76□□□□□ -0.69
BEST1-201ENST00000378043 NR6A1Q15406 480 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 CRY1Q16526 586 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 AARS2Q5JTZ9 985 aaKnown RBP10.76□□□□□ -0.69
BEST1-201ENST00000378043 OTUD3Q5T2D3 398 aaPredicted RBP10.76□□□□□ -0.69
BEST1-201ENST00000378043 ATXN7L2Q5T6C5 722 aaPredicted RBP10.76□□□□□ -0.69
BEST1-201ENST00000378043 FAM86B1Q8N7N1 296 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 PLD4Q96BZ4 506 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 NSMCE2Q96MF7 247 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 ZNF583Q96ND8 569 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 CIPCQ9C0C6 399 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 IPPKQ9H8X2 491 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 ZMYM5Q9UJ78 669 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 ZNF711Q9Y462 761 aa10.76□□□□□ -0.69
BEST1-201ENST00000378043 POLR3HQ9Y535 204 aaPredicted RBP10.76□□□□□ -0.69
BEST1-201ENST00000378043 PCDHGA11Q9Y5H2 935 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms