RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 TPM1P09493 284 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 HLA-DPA1P20036 260 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 CASRP41180 1078 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 RPS18P62269 152 aaKnown RBP12.86□□□□□ -0.35
RPF1-201ENST00000370654 XIAPP98170 497 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 SRSF1Q07955 248 aaKnown RBP eCLIP12.86□□□□□ -0.35
RPF1-201ENST00000370654 MPP3Q13368 585 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 LDLRAP1Q5SW96 308 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 PRAMEF17Q5VTA0 474 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 METRNLQ641Q3 311 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 DAAM2Q86T65 1068 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 CCDC50Q8IVM0 306 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 OR4K2Q8NGD2 314 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 ZNF398Q8TD17 642 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 STAMBPL1Q96FJ0 436 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 ZDHHC12Q96GR4 267 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 TTC25Q96NG3 672 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 EFHD1Q9BUP0 239 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 GBA3Q9H227 469 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 FAM96AQ9H5X1 160 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 IMP3Q9NV31 184 aaKnown RBP12.86□□□□□ -0.35
RPF1-201ENST00000370654 DUSP10Q9Y6W6 482 aa12.86□□□□□ -0.35
RPF1-201ENST00000370654 CDC14CA4D256 554 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 H7C0C1 242 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 STX7O15400 261 aaKnown RBP12.85□□□□□ -0.35
RPF1-201ENST00000370654 MTSS1O43312 755 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 DNAJB5O75953 348 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 PRAMEF1O95521 474 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 PRSS56P0CW18 603 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 MTHFD1P11586 935 aaKnown RBP12.85□□□□□ -0.35
RPF1-201ENST00000370654 VCLP18206 1134 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 PSMB4P28070 264 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 HALP42357 657 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 ATP5OP48047 213 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 CDKN1CP49918 316 aaPredicted RBP12.85□□□□□ -0.35
RPF1-201ENST00000370654 FOXK1P85037 733 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 TUBB3Q13509 450 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 DNASE1L3Q13609 305 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 SPARCL1Q14515 664 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 GPR19Q15760 415 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPF1-201ENST00000370654 CRTC2Q53ET0 693 aaPredicted RBP12.85□□□□□ -0.35
RPF1-201ENST00000370654 LCN10Q6JVE6 187 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 RANBP10Q6VN20 620 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 PPP1R3BQ86XI6 285 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 CNGA4Q8IV77 575 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 RBM12BQ8IXT5 1001 aaKnown RBP12.85□□□□□ -0.35
RPF1-201ENST00000370654 SLC38A9Q8NBW4 561 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 OR13C4Q8NGS5 318 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 ACTL9Q8TC94 416 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 RMDN2Q96LZ7 410 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 VAT1Q99536 393 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 TRIM55Q9BYV6 548 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 LHX9Q9NQ69 397 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 SMOXQ9NWM0 555 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 HACD3Q9P035 362 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 PKP3Q9Y446 797 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 COL12A1Q99715 3063 aa12.85□□□□□ -0.35
RPF1-201ENST00000370654 OR5K3A6NET4 321 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 MGAT4DA6NG13 374 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 HACD1B0YJ81 288 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 APOC4-APOC2K7ER74 178 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 KCNJ13O60928 360 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 CREG1O75629 220 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 SRP72O76094 671 aaKnown RBP12.84□□□□□ -0.35
RPF1-201ENST00000370654 APOC2P02655 101 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 POLBP06746 335 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 MSH3P20585 1137 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 AKT1P31749 480 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 KPNA2P52292 529 aaKnown RBP12.84□□□□□ -0.35
RPF1-201ENST00000370654 TMPRSS15P98073 1019 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 MC1RQ01726 317 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 OTUD4Q01804 1114 aaKnown RBP12.84□□□□□ -0.35
RPF1-201ENST00000370654 LAMB3Q13751 1172 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 LACTB2Q53H82 288 aaPredicted RBP12.84□□□□□ -0.35
RPF1-201ENST00000370654 FAM69BQ5VUD6 431 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 ZDHHC20Q5W0Z9 365 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 DENND5AQ6IQ26 1287 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 C11orf63Q6NUN7 778 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 SIDT2Q8NBJ9 832 aaKnown RBP12.84□□□□□ -0.35
RPF1-201ENST00000370654 CCDC110Q8TBZ0 833 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 C12orf66Q96MD2 445 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 FSD1LQ9BXM9 530 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 ASB8Q9H765 288 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 SLC24A2Q9UI40 661 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 TLK1Q9UKI8 766 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 TRHDEQ9UKU6 1024 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 PADI1Q9ULC6 663 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 REXO2Q9Y3B8 237 aaKnown RBP12.84□□□□□ -0.35
RPF1-201ENST00000370654 DNMT3AQ9Y6K1 912 aaPredicted RBP12.84□□□□□ -0.35
RPF1-201ENST00000370654 NBASA2RRP1 2371 aa12.84□□□□□ -0.35
RPF1-201ENST00000370654 TNRC6AQ8NDV7 1962 aaKnown RBP12.83□□□□□ -0.35
RPF1-201ENST00000370654 PIPSLA2A3N6 862 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 OR6C74A6NCV1 312 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 SOWAHDA6NJG2 315 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 LPOP22079 712 aaPredicted RBP12.83□□□□□ -0.36
RPF1-201ENST00000370654 GEMP55040 296 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 XRCC4Q13426 336 aa12.83□□□□□ -0.36
RPF1-201ENST00000370654 ITGA9Q13797 1035 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms