RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 CASC4Q6P4E1 433 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 TMEM71Q6P5X7 295 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 CCDC137Q6PK04 289 aaKnown RBP9.14□□□□□ -0.95
MRPL55-216ENST00000366744 ABRAXAS1Q6UWZ7 409 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 CERS6Q6ZMG9 384 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 C11orf96Q7Z7L8 435 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 CLEC14AQ86T13 490 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 RCBTB1Q8NDN9 531 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 GSDMBQ8TAX9 411 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 HNRNPLLQ8WVV9 542 aaKnown RBP9.14□□□□□ -0.95
MRPL55-216ENST00000366744 CDKN2AIPNLQ96HQ2 116 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 NAF1Q96HR8 494 aaKnown RBP9.14□□□□□ -0.95
MRPL55-216ENST00000366744 C12orf66Q96MD2 445 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 SLC46A1Q96NT5 459 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 OSBPL9Q96SU4 736 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 CCM2Q9BSQ5 444 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 AP1M1Q9BXS5 423 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 DPH1Q9BZG8 443 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 WWP1Q9H0M0 922 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 CASS4Q9NQ75 786 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 CATSPERZQ9NTU4 200 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 SMARCAL1Q9NZC9 954 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 SLC23A2Q9UGH3 650 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 KLHL3Q9UH77 587 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 RIMKLBQ9ULI2 386 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 SNX12Q9UMY4 172 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 TCAF1Q9Y4C2 921 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 PCDHGA7Q9Y5G6 932 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 COLEC10Q9Y6Z7 277 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 NBEAQ8NFP9 2946 aa9.14□□□□□ -0.95
MRPL55-216ENST00000366744 LAMA5O15230 3695 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 MN1Q10571 1320 aaPredicted RBP9.13□□□□□ -0.95
MRPL55-216ENST00000366744 AGAP14A8MT82 685 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 A8MU76 341 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 CDRT15L2A8MXV6 281 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 TAF4O00268 1085 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 CASC3O15234 703 aaKnown RBP9.13□□□□□ -0.95
MRPL55-216ENST00000366744 KLK10O43240 276 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 TLX3O43711 291 aaPredicted RBP9.13□□□□□ -0.95
MRPL55-216ENST00000366744 KRT37O76014 449 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 KRT14P02533 472 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 CAPNS1P04632 268 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 OR56A5P0C7T3 313 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 ZSCAN5DPP0CG00 497 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 LIPCP11150 499 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 HGFP14210 728 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 ITIH1P19827 911 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 SLC5A2P31639 672 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 KCNJ1P48048 391 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 NPY2RP49146 381 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 FNTAP49354 379 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 TTPAP49638 278 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 ARL4DP49703 201 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 GNG11P61952 73 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 PRKAA1Q13131 559 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 SQSTM1Q13501 440 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 BOP1Q14137 746 aaKnown RBP9.13□□□□□ -0.95
MRPL55-216ENST00000366744 C16orf72Q14CZ0 275 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 TRIP13Q15645 432 aaPredicted RBP9.13□□□□□ -0.95
MRPL55-216ENST00000366744 COL28A1Q2UY09 1125 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 PCID2Q5JVF3 399 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 METRNLQ641Q3 311 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 IRGCQ6NXR0 463 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 C19orf48Q6RUI8 117 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 PACS1Q6VY07 963 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 PRUNE1Q86TP1 453 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 OOSP2Q86WS3 158 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 CFAP206Q8IYR0 622 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 RASGEF1CQ8N431 466 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 PRELID2Q8N945 189 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 GLIS1Q8NBF1 620 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 OR4L1Q8NH43 312 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 ACTRT1Q8TDG2 376 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 ZDHHC12Q96GR4 267 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 PDLIM2Q96JY6 352 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 LINC00615Q96LM1 132 aaPredicted RBP9.13□□□□□ -0.95
MRPL55-216ENST00000366744 TGM7Q96PF1 710 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 TBC1D10AQ9BXI6 508 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 ASPSCR1Q9BZE9 553 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 KCNF1Q9H3M0 494 aa9.13□□□□□ -0.95
MRPL55-216ENST00000366744 XAB2Q9HCS7 855 aaKnown RBP9.13□□□□□ -0.95
MRPL55-216ENST00000366744 TTC7AQ9ULT0 858 aaPredicted RBP9.13□□□□□ -0.95
MRPL55-216ENST00000366744 IGLV3-16A0A075B6K0 115 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 TRBV5-4A0A0C4DH59 114 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 PRAMEF33A0A0G2JMD5 474 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 C17orf113A0A1B0GUU1 675 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 CCDC162PA2VCL2 907 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 CTAGE9A4FU28 777 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 EFCAB7A8K855 629 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 STMND1H3BQB6 276 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 MATN2O00339 956 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 LIN7AO14910 233 aaPredicted RBP9.12□□□□□ -0.95
MRPL55-216ENST00000366744 NVLO15381 856 aaKnown RBP9.12□□□□□ -0.95
MRPL55-216ENST00000366744 TOX3O15405 576 aaPredicted RBP9.12□□□□□ -0.95
MRPL55-216ENST00000366744 MAP3K7O43318 606 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 PRAMEF10O60809 474 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 GOT2P00505 430 aaKnown RBP9.12□□□□□ -0.95
MRPL55-216ENST00000366744 POLBP06746 335 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 ANKRD34CP0C6C1 535 aa9.12□□□□□ -0.95
MRPL55-216ENST00000366744 BRAFP15056 766 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms