RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 TUBGCP5Q96RT8 1024 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 PCBD2Q9H0N5 130 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 BATF3Q9NR55 127 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 SLCO3A1Q9UIG8 710 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 AP4S1Q9Y587 144 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 MARF1Q9Y4F3 1742 aaKnown RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 NPHS1O60500 1241 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 POP7O75817 140 aaKnown RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 ATP1B2P14415 290 aaPredicted RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 EN2P19622 333 aaPredicted RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 PPIBP23284 216 aaKnown RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 GSSP48637 474 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 NRG1Q02297 640 aaPredicted RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 PTPRCAPQ14761 206 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 C16orf87Q6PH81 154 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 ADHFE1Q8IWW8 467 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 CPSF7Q8N684 471 aaKnown RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 NECTIN4Q96NY8 510 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 NPAS2Q99743 824 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 TMEM79Q9BSE2 394 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 MCMBPQ9BTE3 642 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 SPATA5L1Q9BVQ7 753 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 KLHL20Q9Y2M5 609 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 K7EPI3 171 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 PGLSO95336 258 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 SLC35G6P0C7Q6 338 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 STC1P52823 247 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 C9orf64Q5T6V5 341 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 TAS1R1Q7RTX1 841 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 PYCR2Q96C36 320 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 C9orf16Q9BUW7 83 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 SEMA6AQ9H2E6 1030 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 HEBP2Q9Y5Z4 205 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 DYTNA2CJ06 578 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 MAFKO60675 156 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 KAT7O95251 611 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 PAPSS2O95340 614 aaPredicted RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 GSCP56915 257 aaPredicted RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 KCNJ2P63252 427 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 RUNX1T1Q06455 604 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 NDUFA9Q16795 377 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 RBM20Q5T481 1227 aaKnown RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 IRGCQ6NXR0 463 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 PHF21AQ96BD5 680 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 NSUN3Q9H649 340 aaKnown RBP13.68□□□□□ -0.22
CTR9-201ENST00000361367 C3orf14Q9HBI5 128 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 ENOPH1Q9UHY7 261 aa13.68□□□□□ -0.22
CTR9-201ENST00000361367 A0A1B0GUL6 1792 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 M0R3G1 203 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 PFDN1O60925 122 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 PNLIPRP1P54315 467 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 C2orf80Q0P641 193 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 LRRC32Q14392 662 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 EIF4HQ15056 248 aaKnown RBP13.67□□□□□ -0.22
CTR9-201ENST00000361367 ZMIZ2Q8NF64 920 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 SLC2A11Q9BYW1 496 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 ITM2CQ9NQX7 267 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 DNAJC28Q9NX36 388 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 MAGEA13PA6NCF6 341 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 BBIP1A8MTZ0 92 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 CLOCKO15516 846 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 FYNP06241 537 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 ZCCHC18P0CG32 403 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 UQCRBP14927 111 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 IFNGR2P38484 337 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 GJA8P48165 433 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 CLCNKAP51800 687 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 BNIP2Q12982 314 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 CAND1Q86VP6 1230 aaKnown RBP13.67□□□□□ -0.22
CTR9-201ENST00000361367 TMEM174Q8WUU8 243 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 CCM2Q9BSQ5 444 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 ARL8BQ9NVJ2 186 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 SIN3BO75182 1162 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 SMNDC1O75940 238 aaKnown RBP eCLIP13.67□□□□□ -0.22
CTR9-201ENST00000361367 UMPSP11172 480 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 DHPSP49366 369 aaPredicted RBP13.67□□□□□ -0.22
CTR9-201ENST00000361367 ZNF805Q5CZA5 627 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 GPRC6AQ5T6X5 926 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 SLC8B1Q6J4K2 584 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 ADCK1Q86TW2 530 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 ZNF598Q86UK7 904 aaKnown RBP13.67□□□□□ -0.22
CTR9-201ENST00000361367 PIM3Q86V86 326 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 OR4A15Q8NGL6 344 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 NACC2Q96BF6 587 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 PGAP3Q96FM1 320 aaPredicted RBP13.67□□□□□ -0.22
CTR9-201ENST00000361367 PPM1MQ96MI6 270 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 GPR22Q99680 433 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 MIPEPQ99797 713 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 ROGDIQ9GZN7 287 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 ZDHHC7Q9NXF8 308 aa13.67□□□□□ -0.22
CTR9-201ENST00000361367 PIP5K1BO14986 540 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 PSMG1O95456 288 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 CFIP05156 583 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 ENO2P09104 434 aaPredicted RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 ALAS2P22557 587 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 POLR2JP52435 117 aaKnown RBP13.66□□□□□ -0.22
CTR9-201ENST00000361367 MAPK12P53778 367 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 STX4Q12846 297 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 FAM26DQ5JW98 314 aa13.66□□□□□ -0.22
CTR9-201ENST00000361367 CASP12Q6UXS9 341 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms