RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CYP20A1Q6UW02 462 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 Q6ZNX1 250 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 DTWD1Q8N5C7 304 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 NT5C3BQ969T7 300 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ACDQ96AP0 544 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ZHX1-C8orf76Q96EF9 292 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 NDEL1Q9GZM8 345 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 TUBB1Q9H4B7 451 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ARID2Q68CP9 1835 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ELOVL7A1L3X0 281 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 TBX1O43435 398 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ABCB7O75027 752 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 SERPINA1P01009 418 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 MYCP01106 439 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 FGF1P05230 155 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 KRT8P05787 483 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 UMPSP11172 480 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 HSD17B1P14061 328 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 MSH3P20585 1137 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 RGS4P49798 205 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ALDH3A2P51648 485 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 NKX2-5P52952 324 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 SEMA3BQ13214 749 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 GTDC1Q4AE62 458 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 UBXN11Q5T124 520 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 FAM151BQ6UXP7 276 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 TMEM199Q8N511 208 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 NKAPQ8N5F7 415 aaKnown RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ABHD11Q8NFV4 315 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 OR10T2Q8NGX3 314 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 MCFD2Q8NI22 146 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF420Q8TAQ5 688 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 NPLOC4Q8TAT6 608 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ASIC4Q96FT7 647 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 TSGA13Q96PP4 275 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 AARSD1Q9BTE6 412 aaKnown RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 PALMDQ9NP74 551 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 NMRK2Q9NPI5 230 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 PRDM8Q9NQV8 689 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 UBA2Q9UBT2 640 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 CRLS1Q9UJA2 301 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 TMA7Q9Y2S6 64 aaKnown RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 CXCR6O00574 342 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 MITFO75030 526 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ULK1O75385 1050 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ITGB1P05556 798 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 RHOCP08134 193 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 CDH1P12830 882 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 IGFBP5P24593 272 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 S100A3P33764 101 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 TRIM60Q495X7 471 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 SPANXN4Q5MJ08 99 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 PIK3R6Q5UE93 754 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 RSBN1Q5VWQ0 802 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ZCCHC8Q6NZY4 707 aaKnown RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF549Q6P9A3 640 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 NANOGNBQ7Z5D8 188 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF598Q86UK7 904 aaKnown RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 OR8H2Q8N162 312 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 LIX1Q8N485 282 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 CLDN19Q8N6F1 224 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 MFSD2AQ8NA29 543 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 KCNN1Q92952 543 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 IMP4Q96G21 291 aaKnown RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF419Q96HQ0 510 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-203ENST00000358528 RMI1Q9H9A7 625 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 TBCCD1Q9NVR7 557 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 OPTCQ9UBM4 332 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 PCDHB9Q9Y5E1 797 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 PCDHGA8Q9Y5G5 932 aa6.49□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 A0A0D9SEW6 157 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 FAM234BA2RU67 622 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 UPK3BL1B0FP48 263 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 UPK3BL2E5RIL1 263 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 KERAO60938 352 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 MBL2P11226 248 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 PIM1P11309 404 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 RHOQP17081 205 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 HLA-DPA1P20036 260 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 EEFSECP57772 596 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 CTBSQ01459 385 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 TAF10Q12962 218 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SLC13A2Q13183 592 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 ZNF177Q13360 481 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SEMA3AQ14563 771 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SPCS2Q15005 226 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 CCL14Q16627 93 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 C6orf141Q5SZD1 244 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 GLB1LQ6UWU2 654 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 C11orf74Q86VG3 221 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SLC22A16Q86VW1 577 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SLC7A5P1Q8MH63 180 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 FAM86B1Q8N7N1 296 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SPPL2AQ8TCT8 520 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 BRSK1Q8TDC3 778 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 SLC16A10Q8TF71 515 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 IGSF8Q969P0 613 aa6.48□□□□□ -1.37
CSDE1-203ENST00000358528 REXO5Q96IC2 774 aaKnown RBP6.48□□□□□ -1.37
CSDE1-203ENST00000358528 HEPHQ9BQS7 1158 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms