RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PSMA1P25786 263 aaKnown RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 CDKN1CP49918 316 aaPredicted RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 CIR1Q86X95 450 aaPredicted RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 SNX7Q9UNH6 387 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 WNT10BO00744 389 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 RARRES1P49788 294 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 PTENP60484 403 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 ILF3Q12906 894 aaKnown RBP eCLIP17.07■□□□□ 0.325e-8■■■■□ 21.1
COL27A1-201ENST00000356083 ENPP7Q6UWV6 458 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 SPATC1Q76KD6 591 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 ASB7Q9H672 318 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 KCNS2Q9ULS6 477 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 CFL1P23528 166 aaKnown RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 CLCN5P51795 746 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 CDK16Q00536 496 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 MAD2L1BPQ15013 274 aaPredicted RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 ALG10BQ5I7T1 473 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 ADNP2Q6IQ32 1131 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 SLC29A4Q7RTT9 530 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 NIFKQ9BYG3 293 aaKnown RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 KLRF1Q9NZS2 232 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 FARSAQ9Y285 508 aaKnown RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 IPO13O94829 963 aaKnown RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 AZGP1P25311 298 aaKnown RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 CDK9P50750 372 aaKnown RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 AP3S2P59780 193 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 TMEM161BQ8NDZ6 487 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 OR4K2Q8NGD2 314 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 APBB2Q92870 758 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 TTYH2Q9BSA4 534 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 CDK12Q9NYV4 1490 aaPredicted RBP17.07■□□□□ 0.32
COL27A1-201ENST00000356083 UCK2Q9BZX2 261 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 UPB1Q9UBR1 384 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 CXCL11O14625 94 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 PGRP06401 933 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 S100A10P60903 97 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 ZFP69Q49AA0 526 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 LIPMQ5VYY2 423 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 FBXW8Q8N3Y1 598 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 AADATQ8N5Z0 425 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 OR7D4Q8NG98 312 aa17.07■□□□□ 0.32
COL27A1-201ENST00000356083 CDC42BPBQ9Y5S2 1711 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 JMJD7P0C870 316 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 SMARCB1Q12824 385 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 DSG2Q14126 1118 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 TTPALQ9BTX7 342 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 ZNF510Q9Y2H8 683 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 SDC2P34741 201 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 GPR68Q15743 365 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 Q4G0T1 1027 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 SLCO6A1Q86UG4 719 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 GPAT4Q86UL3 456 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 KIAA1683Q9H0B3 1180 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 TRIM36Q9NQ86 728 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 FBXO9Q9UK97 447 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-201ENST00000356083 CEP152O94986 1710 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 SLC30A4O14863 429 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 PAGE1O75459 146 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 GABBR2O75899 941 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 CCR10P46092 362 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 RFX5P48382 616 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-201ENST00000356083 ARPC4P59998 168 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 UBXN11Q5T124 520 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 SERINC1Q9NRX5 453 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 SPATA31E1Q6ZUB1 1445 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 KAT7O95251 611 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 BDH1Q02338 343 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 RPL6Q02878 288 aaKnown RBP17.06■□□□□ 0.32
COL27A1-201ENST00000356083 CLEC12AQ5QGZ9 265 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 RFWD3Q6PCD5 774 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 RANBP3LQ86VV4 465 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-201ENST00000356083 UROC1Q96N76 676 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 VAT1Q99536 393 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 NDC1Q9BTX1 674 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 B3GALT2O43825 422 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 NFATC1O95644 943 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 CSTF1Q05048 431 aaKnown RBP17.06■□□□□ 0.32
COL27A1-201ENST00000356083 SLC10A7Q0GE19 358 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 GRHL1Q9NZI5 618 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 SPATA7Q9P0W8 599 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 BAIAP2Q9UQB8 552 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 TIMM22Q9Y584 194 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 TISP43B9A030 160 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 SNAP91O60641 907 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 OR12D2P58182 307 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 LIPEQ05469 1076 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 GRIK2Q13002 908 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 TAS1R3Q7RTX0 852 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 LAS2Q8IYD9 372 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 THEM6Q8WUY1 208 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 SLC39A3Q9BRY0 314 aa17.06■□□□□ 0.32
COL27A1-201ENST00000356083 TMEM121BQ9BXQ6 578 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-201ENST00000356083 TTYH1Q9H313 450 aaPredicted RBP17.06■□□□□ 0.32
COL27A1-201ENST00000356083 EIF3KQ9UBQ5 218 aaKnown RBP17.06■□□□□ 0.32
COL27A1-201ENST00000356083 NARSO43776 548 aaKnown RBP17.05■□□□□ 0.32
COL27A1-201ENST00000356083 ARSKQ6UWY0 536 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 AKAP14Q86UN6 197 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 ETNPPLQ8TBG4 499 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 ACP6Q9NPH0 428 aa17.05■□□□□ 0.32
COL27A1-201ENST00000356083 GMIPQ9P107 970 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms