RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 EMID1Q96A84 441 aaPredicted RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 PGM2Q96G03 612 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TRMOQ9BU70 441 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TBC1D17Q9HA65 648 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ZDHHC4Q9NPG8 344 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TUBA8Q9NY65 449 aaPredicted RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 NUP50Q9UKX7 468 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 KCNIP3Q9Y2W7 256 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TELO2Q9Y4R8 837 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 PAGE1O75459 146 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ITGB1P05556 798 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 APLP1P51693 650 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 CRYBB1P53674 252 aaPredicted RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 MUC13Q9H3R2 512 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 NOL11Q9H8H0 719 aaKnown RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 FARSBQ9NSD9 589 aaKnown RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TAS2R14Q9NYV8 317 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ERVW-1Q9UQF0 538 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 FADS3Q9Y5Q0 445 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 C5orf60A6NFR6 353 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 IST1P53990 364 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 SCN1BQ07699 218 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ITGA7Q13683 1181 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 HECTD2Q5U5R9 776 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 SPPL2CQ8IUH8 684 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 SPAG16Q8N0X2 631 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TWIST2Q8WVJ9 160 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 RIPOR3Q96MK2 946 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 SIRPGQ9P1W8 387 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 A0A1B0GVC2 190 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 MSX2P35548 267 aaPredicted RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 RPS9P46781 194 aaKnown RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 SLC5A9Q2M3M2 681 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 CEP97Q8IW35 865 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 RC3H2Q9HBD1 1191 aaKnown RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 HPSEQ9Y251 543 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 PLEKHA6Q9Y2H5 1048 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 E7ENX8 843 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ABHD2P08910 425 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 MATKP42679 507 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 CDK18Q07002 472 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 RASGRP3Q8IV61 690 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF527Q8NB42 609 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 OR2L2Q8NH16 312 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ABCD2Q9UBJ2 740 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 PCYOX1Q9UHG3 505 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 IPO13O94829 963 aaKnown RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TGDSO95455 350 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 RIN1Q13671 783 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 HSDL2Q6YN16 418 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 FRMD7Q6ZUT3 714 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 SNTG1Q9NSN8 517 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 PARPBPQ9NWS1 579 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 PLK2Q9NYY3 685 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 A0A1W2PQH9 124 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 H3BUI4 141 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 DLG2Q15700 870 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF627Q7L945 461 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 RALGPS2Q86X27 583 aaPredicted RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 HDDC3Q8N4P3 179 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 H0YJX3 145 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ATAT1Q5SQI0 421 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TREML1Q86YW5 311 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TLR10Q9BXR5 811 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 CLDN11O75508 207 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 COL6A1P12109 1028 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 CAV3P56539 151 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 PRKCDQ05655 676 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 C6orf52Q5T4I8 152 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 FEM1CQ96JP0 617 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TIMMDC1Q9NPL8 285 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 KANTRA0A1W2PQU2 76 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 OR6C75A6NL08 312 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 C9J4A7 227 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ANKRD63C9JTQ0 380 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 WNT10BO00744 389 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 SLC31A1O15431 190 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ENTPD5O75356 428 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 CALCAP01258 141 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ARFRP1Q13795 201 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 CRTC2Q53ET0 693 aaPredicted RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 LRRC38Q5VT99 294 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 AAGABQ6PD74 315 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 HFE2Q6ZVN8 426 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 CAND1Q86VP6 1230 aaKnown RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ZBTB2Q8N680 514 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ERBB2P04626 1255 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 RBM34P42696 430 aaKnown RBP5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 SLC25A52Q3SY17 297 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TMEM164Q5U3C3 297 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 ZNF366Q8N895 744 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 PCDH19Q8TAB3 1148 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TOR3AQ9H497 397 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 TRPV4Q9HBA0 871 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 PNPOQ9NVS9 261 aa5.72□□□□□ -1.49
SRGAP1-201ENST00000355086 A0A1W2PQ67 120 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 IFNA21P01568 189 aa5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 MRPS5P82675 430 aaKnown RBP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 ILF3Q12906 894 aaKnown RBP eCLIP5.71□□□□□ -1.49
SRGAP1-201ENST00000355086 DNASE1L3Q13609 305 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms