RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TMEM233B4DJY2 109 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 OR1I1O60431 355 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 NRP2O60462 931 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 CYP11A1P05108 521 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 VIPR1P32241 457 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 ETV3P41162 512 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 PRKD1Q15139 912 aaPredicted RBP13.52□□□□□ -0.24
SMC6-201ENST00000351948 ZNHIT3Q15649 155 aaPredicted RBP13.52□□□□□ -0.24
SMC6-201ENST00000351948 PAOXQ6QHF9 649 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 ZMIZ2Q8NF64 920 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 C1orf74Q96LT6 269 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 BRINP2Q9C0B6 783 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 ARMC7Q9H6L4 198 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 CNOT6Q9ULM6 557 aaKnown RBP13.52□□□□□ -0.24
SMC6-201ENST00000351948 AP4S1Q9Y587 144 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 ZNF780BQ9Y6R6 833 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 NRAPQ86VF7 1730 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 KRT87PA6NCN2 255 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 PLK4O00444 970 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 CLOCKO15516 846 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 POP7O75817 140 aaKnown RBP13.52□□□□□ -0.24
SMC6-201ENST00000351948 MT-ND1P03886 318 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 CST5P28325 142 aaPredicted RBP13.52□□□□□ -0.24
SMC6-201ENST00000351948 CD70P32970 193 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 CASP9P55211 416 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 RING1Q06587 406 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 SPESP1Q6UW49 350 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 SLC39A11Q8N1S5 342 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 FITM2Q8N6M3 262 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 FAM46DQ8NEK8 389 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 ZFP28Q8NHY6 868 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 ZNF778Q96MU6 729 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 SORCS3Q9UPU3 1222 aa13.52□□□□□ -0.24
SMC6-201ENST00000351948 A0A1W2PP55 124 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 PSMG1O95456 288 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 SEC24AO95486 1093 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 KLF8O95600 359 aaPredicted RBP13.52□□□□□ -0.25
SMC6-201ENST00000351948 BUD31P41223 144 aaPredicted RBP13.52□□□□□ -0.25
SMC6-201ENST00000351948 IDH2P48735 452 aaKnown RBP13.52□□□□□ -0.25
SMC6-201ENST00000351948 C1QTNF8P60827 252 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 HMGCS1Q01581 520 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 ZNF776Q68DI1 518 aaPredicted RBP13.52□□□□□ -0.25
SMC6-201ENST00000351948 LRRC74BQ6ZQY2 392 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 TOP1MTQ969P6 601 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 LENG8Q96PV6 779 aaPredicted RBP13.52□□□□□ -0.25
SMC6-201ENST00000351948 U3KQV3 271 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 M0R3G1 203 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 GMPRP36959 345 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 BDKRB1P46663 353 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 CYP4F3Q08477 520 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 DHCR24Q15392 516 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 DEPDC1Q5TB30 811 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 NRSN1Q8IZ57 195 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 OVCA2Q8WZ82 227 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 SMARCD2Q92925 531 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 MCOLN1Q9GZU1 580 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 DUSP12Q9UNI6 340 aa13.52□□□□□ -0.25
SMC6-201ENST00000351948 MYH9P35579 1960 aaKnown RBP13.51□□□□□ -0.25
SMC6-201ENST00000351948 FAM47E-STBD1D6RA91 191 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 LDB2O43679 373 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 HSPA13P48723 471 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 FOXM1Q08050 763 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 GPR33Q49SQ1 333 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 MED27Q6P2C8 311 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 TCAIMQ8N3R3 496 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 XAGE5Q8WWM1 108 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 P2RY13Q9BPV8 354 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 GRIP2Q9C0E4 1043 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 REEP1Q9H902 201 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 KRCC1Q9NPI7 259 aaPredicted RBP13.51□□□□□ -0.25
SMC6-201ENST00000351948 PPM1HQ9ULR3 514 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 VPS4AQ9UN37 437 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 FAM159BA6NKW6 160 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 TRAFD1O14545 582 aaPredicted RBP13.51□□□□□ -0.25
SMC6-201ENST00000351948 ITM2AO43736 263 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 MAFKO60675 156 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 ECI2O75521 394 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 GGT5P36269 586 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 KIR3DL1P43629 444 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 SULT1C3Q6IMI6 304 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 FAM171BQ6P995 826 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 HPS6Q86YV9 775 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 ULK2Q8IYT8 1036 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 GALPQ9UBC7 116 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 PLAGL1Q9UM63 463 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 HERC2P3Q9BVR0 1158 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 GMEB2Q9UKD1 530 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 RFXAPO00287 272 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 STX4Q12846 297 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 GPRC6AQ5T6X5 926 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 RNF44Q7L0R7 432 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 STX19Q8N4C7 294 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 KLHDC9Q8NEP7 349 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 TCEAL4Q96EI5 215 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 C7orf26Q96N11 449 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 CLSTN3Q9BQT9 956 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 KLHL20Q9Y2M5 609 aa13.51□□□□□ -0.25
SMC6-201ENST00000351948 CPED1A4D0V7 1026 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 SLC28A2O43868 658 aa13.5□□□□□ -0.25
SMC6-201ENST00000351948 HNF1BP35680 557 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms