RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 DNAJB14Q8TBM8 379 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 SPATA9Q9BWV2 254 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 MYOZ2Q9NPC6 264 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 DCAF16Q9NXF7 216 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 FNIP2Q9P278 1114 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 FAM198AQ9UFP1 575 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 MUTYHQ9UIF7 546 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 PCOLCE2Q9UKZ9 415 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 MAFFQ9ULX9 164 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 COPS3Q9UNS2 423 aa10.53□□□□□ -0.72
CAPN3-203ENST00000349748 PRSS44E7EML9 344 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 FXYD1O00168 92 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 WNT10BO00744 389 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 H2AFYO75367 372 aaKnown RBP10.52□□□□□ -0.73
CAPN3-203ENST00000349748 ANGPTL1O95841 491 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 SLC6A2P23975 617 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 GADD45AP24522 165 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 MYL9P24844 172 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 CCT3P49368 545 aaKnown RBP10.52□□□□□ -0.73
CAPN3-203ENST00000349748 CDH6P55285 790 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 FCGRTP55899 365 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 SP2Q02086 613 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 CDK5R2Q13319 367 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 BAK1Q16611 211 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 SMN1Q16637 294 aaKnown RBP10.52□□□□□ -0.73
CAPN3-203ENST00000349748 HADHQ16836 314 aaKnown RBP10.52□□□□□ -0.73
CAPN3-203ENST00000349748 AAK1Q2M2I8 961 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 IL31Q6EBC2 164 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 STRA8Q7Z7C7 330 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 PM20D2Q8IYS1 436 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 CAMKK1Q8N5S9 505 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 AMER2Q8N7J2 671 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF606Q8WXB4 792 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF516Q92618 1163 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 CERS2Q96G23 380 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 KLHL15Q96M94 604 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 KCNS3Q9BQ31 491 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 MKLN1Q9UL63 735 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 OGDHLQ9ULD0 1010 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 HACD1B0YJ81 288 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 YKT6O15498 198 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 KATNA1O75449 491 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 CNTN5O94779 1100 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 HSD17B1P14061 328 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 PRKACGP22612 351 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 RPS3P23396 243 aaKnown RBP eCLIP10.52□□□□□ -0.73
CAPN3-203ENST00000349748 MIPP30301 263 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 CA5AP35218 305 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 GLUD2P49448 558 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 CPT1AP50416 773 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 ERVK-8P63133 956 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 HOXC5Q00444 222 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF273Q14593 569 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 PTPRRQ15256 657 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 UGT3A2Q3SY77 523 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 PRSS36Q5K4E3 855 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 MOXD1Q6UVY6 613 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 ZYG11AQ6WRX3 759 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 OTOP1Q7RTM1 612 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 CLEC14AQ86T13 490 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 TCTE3Q8IZS6 198 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 TMEM151AQ8N4L1 468 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 AGBL3Q8NEM8 1001 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 FRS2Q8WU20 508 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 AURKBQ96GD4 344 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-203ENST00000349748 TMEM39BQ9GZU3 492 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 IL22Q9GZX6 179 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 PPIL3Q9H2H8 161 aaKnown RBP10.52□□□□□ -0.73
CAPN3-203ENST00000349748 APOBEC3GQ9HC16 384 aaKnown RBP10.52□□□□□ -0.73
CAPN3-203ENST00000349748 ACOT13Q9NPJ3 140 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 ABCD2Q9UBJ2 740 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF70Q9UC06 446 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-203ENST00000349748 STOML2Q9UJZ1 356 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 PCDHGB1Q9Y5G3 927 aa10.52□□□□□ -0.73
CAPN3-203ENST00000349748 ZFC3H1O60293 1989 aaKnown RBP10.51□□□□□ -0.73
CAPN3-203ENST00000349748 LOC100130705A0A1B0GUX0 176 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 LRRC72A6NJI9 287 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 FZD9O00144 591 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 HUS1O60921 280 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 ADAM11O75078 769 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 SNX4O95219 450 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 HLA-DOAP06340 250 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 PCSK2P16519 638 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 SREBF1P36956 1147 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 AVPR1AP37288 418 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 GSK3BP49841 420 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 CLCN7P51798 805 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 BLVRAP53004 296 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 FKBP1AP62942 108 aaKnown RBP10.51□□□□□ -0.73
CAPN3-203ENST00000349748 SEMA3BQ13214 749 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 WDR44Q5JSH3 913 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 PIK3R6Q5UE93 754 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.51□□□□□ -0.73
CAPN3-203ENST00000349748 APOL4Q9BPW4 351 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 VPS33BQ9H267 617 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 ELOVL6Q9H5J4 265 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 RAPGEFL1Q9UHV5 662 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 AUP1Q9Y679 476 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 A0A1W2PP18 115 aa10.51□□□□□ -0.73
CAPN3-203ENST00000349748 TMEM150BA6NC51 233 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms