RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 L3HYPDHQ96EM0 354 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 FEM1AQ9BSK4 669 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 FICDQ9BVA6 458 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 AASSQ9UDR5 926 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 INTS6Q9UL03 887 aaKnown RBP18.42■□□□□ 0.54
SCARF1-202ENST00000348987 GPR45Q9Y5Y3 372 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 LOC100130705A0A1B0GUX0 176 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 ZNF865P0CJ78 1059 aaPredicted RBP18.42■□□□□ 0.54
SCARF1-202ENST00000348987 RAP2AP10114 183 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 NAT1P18440 290 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 PRKACGP22612 351 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 TRPC1P48995 793 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 INTS6LQ5JSJ4 861 aaKnown RBP18.42■□□□□ 0.54
SCARF1-202ENST00000348987 COLEC12Q5KU26 742 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 NEK10Q6ZWH5 1172 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 ISCA2Q86U28 154 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 CCDC103Q8IW40 242 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 DTWD1Q8N5C7 304 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 MCOLN3Q8TDD5 553 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 YIPF6Q96EC8 236 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 VAT1Q99536 393 aa18.42■□□□□ 0.54
SCARF1-202ENST00000348987 A0A1B0GTL3 188 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 ISPDA4D126 451 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 CCDC154A6NI56 674 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 TNPO2O14787 897 aaKnown RBP18.41■□□□□ 0.54
SCARF1-202ENST00000348987 SNX2O60749 519 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 CNTN5O94779 1100 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 PSMB9P28065 219 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 LHX1P48742 406 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 UFM1P61960 85 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 HERVK_113P63132 956 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 TOP3AQ13472 1001 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-202ENST00000348987 RCAN2Q14206 197 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 RYBPQ8N488 228 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-202ENST00000348987 OR52K2Q8NGK3 314 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 MCFD2Q8NI22 146 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 SMARCD1Q96GM5 515 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 ERVK-6Q9BXR3 956 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 CENPBD1B2RD01 187 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 TAF4O00268 1085 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 HPRP00739 348 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 F9P00740 461 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 THP07101 528 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 CD6P30203 668 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 GRK3P35626 688 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 ZFP36L2P47974 494 aaKnown RBP18.41■□□□□ 0.54
SCARF1-202ENST00000348987 CHRNB3Q05901 458 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 FAM98BQ52LJ0 330 aaKnown RBP18.41■□□□□ 0.54
SCARF1-202ENST00000348987 FRS2Q8WU20 508 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 LGALS12Q96DT0 336 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 BCL7BQ9BQE9 202 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 CARS2Q9HA77 564 aaKnown RBP18.41■□□□□ 0.54
SCARF1-202ENST00000348987 RRAGCQ9HB90 399 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 FAM105AQ9NUU6 356 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 UTS2RQ9UKP6 389 aa18.41■□□□□ 0.54
SCARF1-202ENST00000348987 FAM92AA1XBS5 289 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 ARL5CA6NH57 179 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 MAFKO60675 156 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 KRT8P05787 483 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 ACVR2AP27037 513 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 GTF2E2P29084 291 aaKnown RBP18.4■□□□□ 0.54
SCARF1-202ENST00000348987 BRCC3P46736 316 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 RACK1P63244 317 aaKnown RBP18.4■□□□□ 0.54
SCARF1-202ENST00000348987 PPP2R2BQ00005 443 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 CCDC58Q4VC31 144 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 SPESP1Q6UW49 350 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 LRRTM3Q86VH5 581 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 SVOPQ8N4V2 548 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 PTERQ96BW5 349 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 SLC39A8Q9C0K1 460 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 ST3GAL5Q9UNP4 418 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 INVSQ9Y283 1065 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 N6AMT1Q9Y5N5 214 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 C17orf102A2RUQ5 167 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 FAM172BPA6NC97 362 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 F8W810 466 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 HS6ST1O60243 411 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 CACNG3O60359 315 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 TULP3O75386 442 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 EEDO75530 441 aaKnown RBP18.4■□□□□ 0.54
SCARF1-202ENST00000348987 MFN2O95140 757 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 CST1P01037 141 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 FGF4P08620 206 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 DNAJB2P25686 324 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 HECTD2Q5U5R9 776 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 SLX4IPQ5VYV7 408 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 CST9Q5W186 159 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 SPATC1Q76KD6 591 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 LDB1Q86U70 411 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-202ENST00000348987 PIM3Q86V86 326 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 PLD3Q8IV08 490 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 PTGR2Q8N8N7 351 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-202ENST00000348987 ARPC5LQ9BPX5 153 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 LRRC3Q9BY71 257 aa18.4■□□□□ 0.54
SCARF1-202ENST00000348987 POLR2EP19388 210 aaKnown RBP18.39■□□□□ 0.54
SCARF1-202ENST00000348987 MTPNP58546 118 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 IL5RAQ01344 420 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 EMX2Q04743 252 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 CDK5R2Q13319 367 aa18.39■□□□□ 0.54
SCARF1-202ENST00000348987 SELPLGQ14242 412 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms