RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 GMEB1Q9Y692 573 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 CEPT1Q9Y6K0 416 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 AK5Q9Y6K8 562 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 COL4A3Q01955 1670 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 A0A087WXM4 84 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 CCDC162PA2VCL2 907 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ARNTLO00327 626 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ZNF197O14709 1029 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 SNAP91O60641 907 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 MOSPD3O75425 235 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 SOAT2O75908 522 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 RASAL1O95294 804 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 VNN2O95498 520 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ESRRBO95718 433 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 MOCS2O96007 188 aaPredicted RBP10.65□□□□□ -0.7
RTN3-201ENST00000338850 CHEK2O96017 543 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ENO2P09104 434 aaPredicted RBP10.65□□□□□ -0.7
RTN3-201ENST00000338850 CAPN3P20807 821 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ATP6V1B2P21281 511 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 SLC6A2P23975 617 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 FASP25445 335 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 HOXD9P28356 352 aaPredicted RBP10.65□□□□□ -0.7
RTN3-201ENST00000338850 HTR1EP28566 365 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ETFBP38117 255 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 CCT8P50990 548 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 EPHA5P54756 1037 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 RAB15P59190 212 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 CLCQ05315 142 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 TWF1Q12792 350 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 IHHQ14623 411 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 PPP1R3AQ16821 1122 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 SLC39A12Q504Y0 691 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 AARS2Q5JTZ9 985 aaKnown RBP10.65□□□□□ -0.7
RTN3-201ENST00000338850 FAM78AQ5JUQ0 283 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 C6orf52Q5T4I8 152 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 TANGO2Q6ICL3 276 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 KRT80Q6KB66 452 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ZNF783Q6ZMS7 281 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ZBTB49Q6ZSB9 765 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 PROSER1Q86XN7 944 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ZNF354CQ86Y25 554 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ADGRG5Q8IZF4 528 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 HS6ST3Q8IZP7 471 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 STK40Q8N2I9 435 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 FBXO39Q8N4B4 442 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 TRPV3Q8NET8 790 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 OR52E4Q8NGH9 312 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ZNF420Q8TAQ5 688 aaPredicted RBP10.65□□□□□ -0.7
RTN3-201ENST00000338850 OSCP1Q8WVF1 389 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 LRTOMTQ8WZ04 291 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ELSPBP1Q96BH3 223 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 LRRC58Q96CX6 371 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 PHF21BQ96EK2 531 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 MOCOSQ96EN8 888 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 CDKN2AIPNLQ96HQ2 116 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 DNAJC1Q96KC8 554 aaKnown RBP10.65□□□□□ -0.7
RTN3-201ENST00000338850 TBATAQ96M53 351 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 RDH12Q96NR8 316 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ZNF382Q96SR6 550 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 SEMA3CQ99985 751 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 MID1IP1Q9NPA3 183 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 HEBP1Q9NRV9 189 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 OLAHQ9NV23 265 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 RIC8BQ9NVN3 520 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 NUDT4Q9NZJ9 180 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 MARCH2Q9P0N8 246 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 GMIPQ9P107 970 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 RSL24D1Q9UHA3 163 aaKnown RBP10.65□□□□□ -0.7
RTN3-201ENST00000338850 POLG2Q9UHN1 485 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 LEF1Q9UJU2 399 aaPredicted RBP10.65□□□□□ -0.7
RTN3-201ENST00000338850 PACSIN3Q9UKS6 424 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 YIPF1Q9Y548 306 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 ST14Q9Y5Y6 855 aa10.65□□□□□ -0.7
RTN3-201ENST00000338850 EP300Q09472 2414 aaPredicted RBP10.65□□□□□ -0.71
RTN3-201ENST00000338850 ZNF292O60281 2723 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 TCRBV5S2A0A599 114 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 FAM234BA2RU67 622 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 TRIM64BA6NI03 449 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 GOLGA8CPA6NN73 597 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 H0YAE9 185 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 UBXN8O00124 270 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 PIP5K1BO14986 540 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 TULP3O75386 442 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 CNTN5O94779 1100 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 OR4Q2P0C623 313 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 SP9P0CG40 484 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 GFAPP14136 432 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 MSH3P20585 1137 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 TACR2P21452 398 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 KCNC1P48547 511 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 TTPAP49638 278 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 PGFP49763 221 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 CDH4P55283 916 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 ERVK-8P63133 956 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 OR4D1Q15615 310 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 CRY1Q16526 586 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 KIF19Q2TAC6 998 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.64□□□□□ -0.71
RTN3-201ENST00000338850 UGT3A1Q6NUS8 523 aa10.64□□□□□ -0.71
RTN3-201ENST00000338850 TPRG1Q6ZUI0 275 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms