RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 PHF24Q9UPV7 400 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 OR1I1O60431 355 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 GPIP06744 558 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 T-ENOLP0DO92 83 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF37AP17032 561 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 PEX2P28328 305 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 DNAJB13P59910 316 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 TMPRSS11BQ86T26 416 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 CYP4Z1Q86W10 505 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF366Q8N895 744 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 FAM47BQ8NA70 645 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 AKAP7Q9P0M2 348 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 URB1O60287 2271 aaKnown RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 A0A087WXM4 84 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 E7ENX8 843 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ASLP04424 464 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 MGAT3Q09327 533 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 FAM26DQ5JW98 314 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 INTS11Q5TA45 600 aaKnown RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 TMEM220Q6QAJ8 160 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 TMC5Q6UXY8 1006 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 SLC13A3Q8WWT9 602 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 PLEKHA8Q96JA3 519 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 RTP3Q9BQQ7 232 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 YIPF2Q9BWQ6 316 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 C1orf109Q9NX04 203 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 LZTS1Q9Y250 596 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 PTGES3LE9PB15 166 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 CFAP206Q8IYR0 622 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 TRPC4Q9UBN4 977 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 B4GALT6Q9UBX8 382 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ACTL7AQ9Y615 435 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 CCDC189A1A4V9 331 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 SERPINB10P48595 397 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ARL4DP49703 201 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ARMC3Q5W041 872 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 NELL1Q92832 810 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 CAPN10Q9HC96 672 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 FBXO10Q9UK96 956 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 PCDHGA11Q9Y5H2 935 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 FADS3Q9Y5Q0 445 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 NUP98P52948 1817 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 SMIM31A0A1B0GVY4 71 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ADAM12O43184 909 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 EPHX1P07099 455 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 RRM2P31350 389 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 SEMA3BQ13214 749 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 GET4Q7L5D6 327 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 LEMD2Q8NC56 503 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 SLC39A13Q96H72 371 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 MAGEE1Q9HCI5 957 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 H2AFY2Q9P0M6 372 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 HCSTQ9UBK5 93 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 DHRS7Q9Y394 339 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 TPRKBQ9Y3C4 175 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 U3KQV3 271 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 K7ERQ8 282 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 C8GP07360 202 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 CRTC3Q6UUV7 619 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 CYP20A1Q6UW02 462 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 KDELC1Q6UW63 502 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 C17orf64Q86WR6 236 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 C2orf73Q8N5S3 287 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ARRDC2Q8TBH0 407 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ELOVL7A1L3X0 281 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ISM1B1AKI9 464 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 NCK1P16333 377 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 SYN1P17600 705 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 HMGCS1Q01581 520 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ABRAXAS1Q6UWZ7 409 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 C8orf59Q8N0T1 100 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 SETD9Q8NE22 299 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 TSPAN14Q8NG11 270 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 OR2T34Q8NGX1 318 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 OR2T3Q8NH03 318 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 UTP15Q8TED0 518 aaKnown RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 SLC22A17Q8WUG5 538 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 RAD51AP1Q96B01 352 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ASB9Q96DX5 294 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 THSD7AQ9UPZ6 1657 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 LEFTY2O00292 366 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 TNFRSF10BO14763 440 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 GUCY1B2O75343 617 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 DIO3P55073 304 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF598Q86UK7 904 aaKnown RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 C7orf61Q8IZ16 206 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 ZNF614Q8N883 585 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 GRIP2Q9C0E4 1043 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 RPS6KA6Q9UK32 745 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 PCM1Q15154 2024 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 G3V2L1 256 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 IGFBP4P22692 258 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 PPP2R1BP30154 601 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 VEGFBP49765 207 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 PTCHD3Q3KNS1 767 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 PSRC1Q6PGN9 363 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 BRAT1Q6PJG6 821 aa6.2□□□□□ -1.42
PRKDC-202ENST00000338368 RTN4RL1Q86UN2 441 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 TXNDC5Q8NBS9 432 aaKnown RBP6.2□□□□□ -1.42
PRKDC-202ENST00000338368 NAT14Q8WUY8 206 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms