RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 H3BNH8 94 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 OR1I1O60431 355 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 ATE1O95260 518 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 CAPN1P07384 714 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 GSTM1P09488 218 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 CYP4B1P13584 511 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 CSF2RAP15509 400 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 DGKAP23743 735 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 CHI3L1P36222 383 aaPredicted RBP6.4□□□□□ -1.38
HMG20A-201ENST00000336216 CCT8P50990 548 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 ARSDP51689 593 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 RHDQ02161 417 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 ENPEPQ07075 957 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 DPYSQ14117 519 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 PTPRRQ15256 657 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 HIST2H2ACQ16777 129 aaPredicted RBP6.4□□□□□ -1.38
HMG20A-201ENST00000336216 PARP15Q460N3 678 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 HIST2H2AA3Q6FI13 130 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 SH2D5Q6ZV89 423 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 LYSMD3Q7Z3D4 306 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 SLC7A5P1Q8MH63 180 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 ITFG1Q8TB96 612 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 SLC22A17Q8WUG5 538 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 TWIST2Q8WVJ9 160 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 IRGQQ8WZA9 623 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 NTAN1Q96AB6 310 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 MYO19Q96H55 970 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 FCRL5Q96RD9 977 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 TCF25Q9BQ70 676 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 C6orf62Q9GZU0 229 aaPredicted RBP6.4□□□□□ -1.38
HMG20A-201ENST00000336216 MIR1-1HGQ9H1L0 117 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 VRTNQ9H8Y1 702 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 SMOXQ9NWM0 555 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 RIMS3Q9UJD0 308 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 TLR6Q9Y2C9 796 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 RNF11Q9Y3C5 154 aa6.4□□□□□ -1.38
HMG20A-201ENST00000336216 TRIOBPQ9H2D6 2365 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 C2orf78A6NCI8 922 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 UPK3BL1B0FP48 263 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 UPK3BL2E5RIL1 263 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 CYP7B1O75881 506 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 RSL1D1O76021 490 aaKnown RBP6.4□□□□□ -1.39
HMG20A-201ENST00000336216 CLDN7O95471 211 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 NADKO95544 446 aaPredicted RBP6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ELK4P28324 431 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 PRDX6P30041 224 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 MAT2AP31153 395 aaKnown RBP6.4□□□□□ -1.39
HMG20A-201ENST00000336216 GPR1P46091 355 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 SLC16A1P53985 500 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 POLR2LP62875 67 aaKnown RBP6.4□□□□□ -1.39
HMG20A-201ENST00000336216 CLCQ05315 142 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 PMS2P3Q13401 168 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 TUBB3Q13509 450 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 TGFBIQ15582 683 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 TRIM60Q495X7 471 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ZBED5Q49AG3 693 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 XKR6Q5GH73 641 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ADGRF1Q5T601 910 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 C17orf99Q6UX52 265 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ZYG11AQ6WRX3 759 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 EFL1Q7Z2Z2 1120 aaKnown RBP6.4□□□□□ -1.39
HMG20A-201ENST00000336216 SERPINA9Q86WD7 417 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 LRRC49Q8IUZ0 686 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 SFRP1Q8N474 314 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.4□□□□□ -1.39
HMG20A-201ENST00000336216 BRSK1Q8TDC3 778 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 KCTD13Q8WZ19 329 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 NCSTNQ92542 709 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ASB9Q96DX5 294 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 MTERF1Q99551 399 aaKnown RBP6.4□□□□□ -1.39
HMG20A-201ENST00000336216 HERC2P3Q9BVR0 1158 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 RHBGQ9H310 441 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ANAPC2Q9UJX6 822 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 GMEB1Q9Y692 573 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 SQORQ9Y6N5 450 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ATAD5Q96QE3 1844 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 GLYATL1P3A0A0U1RQE8 302 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 LDB2O43679 373 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 NOBOXO60393 691 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 KRT8P05787 483 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 GALTP07902 379 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 DPP6P42658 865 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 RELAQ04206 551 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 GALNT2Q10471 571 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 MADCAM1Q13477 382 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 SQLEQ14534 574 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 RAB39AQ14964 217 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 KIAA0319Q5VV43 1072 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 FAM91A1Q658Y4 838 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ERAP2Q6P179 960 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 TMEM53Q6P2H8 277 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 Q6ZVU0 165 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 SLCO6A1Q86UG4 719 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 TMEM199Q8N511 208 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ZNF296Q8WUU4 475 aaPredicted RBP6.4□□□□□ -1.39
HMG20A-201ENST00000336216 SORCS1Q8WY21 1168 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ZFYVE19Q96K21 471 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 ITM2CQ9NQX7 267 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 FAIMQ9NVQ4 179 aa6.4□□□□□ -1.39
HMG20A-201ENST00000336216 POLR3BQ9NW08 1133 aaPredicted RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms