RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 FAM126BQ8IXS8 530 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 EFHBQ8N7U6 833 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 GIPC2Q8TF65 315 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 COG8Q96MW5 612 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 DOK1Q99704 481 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 RAI2Q9Y5P3 530 aa15.16■□□□□ 0.02
BRCC3-201ENST00000330045 ANKRD12Q6UB98 2062 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 ANKRD66B4E2M5 251 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 H3BNC9 293 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 STX7O15400 261 aaKnown RBP15.15■□□□□ 0.02
BRCC3-201ENST00000330045 CAPN1P07384 714 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 G6PDP11413 515 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 YAP1P46937 504 aaKnown RBP15.15■□□□□ 0.02
BRCC3-201ENST00000330045 TMEM214Q6NUQ4 689 aaKnown RBP15.15■□□□□ 0.02
BRCC3-201ENST00000330045 RNF19BQ6ZMZ0 732 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 TERB1Q8NA31 727 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 ABTB1Q969K4 478 aaPredicted RBP15.15■□□□□ 0.02
BRCC3-201ENST00000330045 GPR62Q9BZJ7 368 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 NTN4Q9HB63 628 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 IRAK4Q9NWZ3 460 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 RHBDL2Q9NX52 303 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 ARNTLO00327 626 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 TULP3O75386 442 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 GNRH1P01148 92 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 SLC11A2P49281 568 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 HTR6P50406 440 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 HLCSP50747 726 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 MTPNP58546 118 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 SELPLGQ14242 412 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 CRY1Q16526 586 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 CYP20A1Q6UW02 462 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 CHST15Q7LFX5 561 aaPredicted RBP15.15■□□□□ 0.02
BRCC3-201ENST00000330045 TAS2R42Q7RTR8 314 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 DTWD1Q8N5C7 304 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 FNDC8Q8TC99 324 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 THAP11Q96EK4 314 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 HBEGFQ99075 208 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 CGREF1Q99674 301 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 ADGRE3Q9BY15 652 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 RETREG1Q9H6L5 497 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 COMMD8Q9NX08 183 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 NUDT4Q9NZJ9 180 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 IFT80Q9P2H3 777 aaPredicted RBP15.15■□□□□ 0.02
BRCC3-201ENST00000330045 ZNHIT2Q9UHR6 403 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 DNMT3LQ9UJW3 386 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 PCDHGA11Q9Y5H2 935 aa15.15■□□□□ 0.02
BRCC3-201ENST00000330045 SCN5AQ14524 2016 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 IQCF5A8MTL0 148 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 DEAF1O75398 565 aaPredicted RBP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 VNN2O95498 520 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 ESR1P03372 595 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 ATP5C1P36542 298 aaKnown RBP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 PTGER3P43115 390 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 ARSFP54793 590 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 DUSP4Q13115 394 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 GPR17Q13304 367 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 C16orf72Q14CZ0 275 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 PTPRRQ15256 657 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 NR6A1Q15406 480 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 ZIK1Q3SY52 487 aaPredicted RBP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 AARS2Q5JTZ9 985 aaKnown RBP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 TMEM26Q6ZUK4 368 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 FRA10AC1Q70Z53 315 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 ITFG1Q8TB96 612 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 PNPT1Q8TCS8 783 aaKnown RBP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 MUS81Q96NY9 551 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 ACTL8Q9H568 366 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 ST14Q9Y5Y6 855 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 COMMD10Q9Y6G5 202 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 H0Y858 1186 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 TMX2-CTNND1H3BSU7 103 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 CBX4O00257 560 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 UPK1AO00322 258 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 LSM1O15116 133 aaKnown RBP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 CLDN11O75508 207 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 F11P03951 625 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 ANXA6P08133 673 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 RHOCP08134 193 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 RAP2AP10114 183 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 ALDH3A2P51648 485 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 DGKQP52824 942 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 CCL23P55773 120 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 FAM189BP81408 668 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 PCBP2Q15366 365 aaKnown RBP eCLIP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 NEDD8Q15843 81 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 C18orf21Q32NC0 220 aaPredicted RBP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 FAM98BQ52LJ0 330 aaKnown RBP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 ELMSAN1Q6PJG2 1045 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 RSPO2Q6UXX9 243 aaPredicted RBP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 GOLGA7Q7Z5G4 137 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 TMBIM1Q969X1 311 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 TLR9Q9NR96 1032 aa15.14■□□□□ 0.01
BRCC3-201ENST00000330045 TNPO3Q9Y5L0 923 aaKnown RBP15.14■□□□□ 0.01
BRCC3-201ENST00000330045 A0A0U1RQS6 177 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 SH3PXD2BA1X283 911 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 IFRD1O00458 451 aaPredicted RBP15.13■□□□□ 0.01
BRCC3-201ENST00000330045 SELPP16109 830 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 HMOX2P30519 316 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 CLCN7P51798 805 aa15.13■□□□□ 0.01
BRCC3-201ENST00000330045 PWP1Q13610 501 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms