RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 BMP7P18075 431 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 RPS6KA3P51812 740 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 RPS24P62847 133 aaKnown RBP11.27□□□□□ -0.61
COL4A5-201ENST00000328300 ITPRIPL2Q3MIP1 535 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 CYS1Q717R9 158 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 ARHGAP22Q7Z5H3 698 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 CLNKQ7Z7G1 428 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 LRRTM4Q86VH4 590 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 C1orf50Q9BV19 199 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 CCDC162PA2VCL2 907 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 H7C0S8 307 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 SLC25A12O75746 678 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 TSPAN19P0C672 248 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 ACTR3P61158 418 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 PRR5P85299 388 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 ARL13AQ5H913 290 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-201ENST00000328300 SIRPB2Q5JXA9 342 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 BROXQ5VW32 411 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 FSTL5Q8N475 847 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-201ENST00000328300 POMGNT2Q8NAT1 580 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 DNAJB14Q8TBM8 379 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 METTL21AQ8WXB1 218 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 ABCG4Q9H172 646 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 DIABLOQ9NR28 239 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 SLC2A4RGQ9NR83 387 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 PNPLA3Q9NST1 481 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 ZNF282Q9UDV7 671 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-201ENST00000328300 CDC14AQ9UNH5 594 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 PSMD13Q9UNM6 376 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 POLR1DQ9Y2S0 133 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 H0Y858 1186 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 ERAL1O75616 437 aaKnown RBP11.27□□□□□ -0.61
COL4A5-201ENST00000328300 UBAP2LQ14157 1087 aaKnown RBP11.27□□□□□ -0.61
COL4A5-201ENST00000328300 DLK2Q6UY11 383 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 MBOAT1Q6ZNC8 495 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-201ENST00000328300 LRRN4Q8WUT4 740 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 APOLD1Q96LR9 279 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 FIZ1Q96SL8 496 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 IL12RB2Q99665 862 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 BCAS3Q9H6U6 928 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 NLE1Q9NVX2 485 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-201ENST00000328300 LRP5O75197 1615 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 WWP2O00308 870 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 RASGRP1O95267 797 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 GDI1P31150 447 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 CDH13P55290 713 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 TAS2R39P59534 338 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 TIGD2Q4W5G0 525 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 RNF19BQ6ZMZ0 732 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 WDR60Q8WVS4 1066 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 COL26A1Q96A83 441 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 PGAP3Q96FM1 320 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-201ENST00000328300 GATA5Q9BWX5 397 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-201ENST00000328300 GSDMCQ9BYG8 508 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 SRMSQ9H3Y6 488 aa11.27□□□□□ -0.61
COL4A5-201ENST00000328300 SLC16A5O15375 505 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 UBXN7O94888 489 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 ANPEPP15144 967 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 RAB33AQ14088 237 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 C16orf72Q14CZ0 275 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 INAQ16352 499 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 ATXN7L2Q5T6C5 722 aaPredicted RBP11.26□□□□□ -0.61
COL4A5-201ENST00000328300 HDDC2Q7Z4H3 204 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 SFRP1Q8N474 314 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 CENPIQ92674 756 aaPredicted RBP11.26□□□□□ -0.61
COL4A5-201ENST00000328300 WRAP53Q9BUR4 548 aaKnown RBP11.26□□□□□ -0.61
COL4A5-201ENST00000328300 SNX10Q9Y5X0 201 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 GTPBP1O00178 669 aaKnown RBP11.26□□□□□ -0.61
COL4A5-201ENST00000328300 SLC28A2O43868 658 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 PSMB9P28065 219 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 CCR4P51679 360 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 PRKAG1P54619 331 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 SLC10A7Q0GE19 358 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 STX4Q12846 297 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 MZT2AQ6P582 158 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 TEX47Q8TBZ9 253 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 POF1BQ8WVV4 589 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 MTERF3Q96E29 417 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 MPP4Q96JB8 637 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 DERL2Q9GZP9 239 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 OXSMQ9NWU1 459 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 PRORSD1PA6NEY8 169 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 ANKRD66B4E2M5 251 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 RGS5O15539 181 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 MPZL2O60487 215 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 MED26O95402 600 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 CST1P01037 141 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 NTRK1P04629 796 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 PRKCHP24723 683 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 CHN2P52757 468 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 MAPK12P53778 367 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 SH3PXD2AQ5TCZ1 1133 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 TYW3Q6IPR3 259 aaKnown RBP11.26□□□□□ -0.61
COL4A5-201ENST00000328300 SIDT2Q8NBJ9 832 aaKnown RBP11.26□□□□□ -0.61
COL4A5-201ENST00000328300 PHOSPHO2Q8TCD6 241 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 TOX2Q96NM4 488 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 SMURF2Q9HAU4 748 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 GMPPBQ9Y5P6 360 aa11.26□□□□□ -0.61
COL4A5-201ENST00000328300 FAM234BA2RU67 622 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms