RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 KLC4Q9NSK0 619 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 SPATS2LQ9NUQ6 558 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 SLC17A4Q9Y2C5 497 aa15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 CFAP20Q9Y6A4 193 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 TDRD6O60522 2096 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-202ENST00000318007 ZNF318Q5VUA4 2279 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 FTH1P02794 183 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 BRAFP15056 766 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 AFF3P51826 1226 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 DLG1Q12959 904 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 FZD2Q14332 565 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 ZKSCAN8Q15776 578 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 SLC30A9Q6PML9 568 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 TBC1D1Q86TI0 1168 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 SPATS2Q86XZ4 545 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 C1orf216Q8TAB5 229 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 HEXDCQ8WVB3 486 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 NXNL1Q96CM4 212 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 TSPAN17Q96FV3 270 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 CCM2Q9BSQ5 444 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 LATS2Q9NRM7 1088 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 SPTY2D1-AS1A0A0U1RR47 76 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 H3BMM5 538 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 TLR4O00206 839 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 ATP8B1O43520 1251 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 ATP5DP30049 168 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 C21orf59P57076 290 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 KIAA1024LP59773 190 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 YPEL5P62699 121 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 IL9RQ01113 521 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 PYCR3Q53H96 274 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 CENPLQ8N0S6 344 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 DNASE2BQ8WZ79 361 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 FAM126AQ9BYI3 521 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 PCED1AQ9H1Q7 454 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 CPSF2Q9P2I0 782 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 IKZF3Q9UKT9 509 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 CORO1CQ9ULV4 474 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 ACOT9Q9Y305 439 aa15.13■□□□□ 0.01
PDLIM5-202ENST00000318007 A0A1W2PR77 199 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 COPEO14579 308 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 CHUKO15111 745 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 AP2A2O94973 939 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 KELP23276 732 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 TEAD1P28347 426 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 EIF2B5Q13144 721 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 GPS2Q13227 327 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 RASA2Q15283 850 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 CROCCP2Q86T23 111 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 AMZ2Q86W34 360 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 PARGQ86W56 976 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 MFSD2AQ8NA29 543 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 FAM86C1Q9NVL1 165 aa15.12■□□□□ 0.01
PDLIM5-202ENST00000318007 NPEPPSL1A6NEC2 478 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 AOAHP28039 575 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 CRABP2P29373 138 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 RPA3P35244 121 aaPredicted RBP15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 ATP1A2P50993 1020 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 HK3P52790 923 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 PTK2BQ14289 1009 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 ZNF528Q3MIS6 628 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 PRRT3Q5FWE3 981 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 MDM1Q8TC05 714 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 SCG3Q8WXD2 468 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 NELL1Q92832 810 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 TMEM159Q96B96 161 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 TLCD1Q96CP7 247 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 SCYL1Q96KG9 808 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 OR2M4Q96R27 311 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 PAIP2Q9BPZ3 127 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 TSSK1BQ9BXA7 367 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 IQCGQ9H095 443 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 STMN4Q9H169 189 aaPredicted RBP15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 UTP6Q9NYH9 597 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 SLC17A7Q9P2U7 560 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 APOBEC3BQ9UH17 382 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 DHRS7Q9Y394 339 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 PCDHGA2Q9Y5H1 932 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 TRBV23OR9-2A0A075B6M9 112 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 NCF1BA6NI72 391 aaPredicted RBP15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 NCF1CA8MVU1 366 aaPredicted RBP15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 TK2O00142 265 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 BTN3A1O00481 513 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 KMOO15229 486 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 ZBTB14O43829 449 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 MAGEC1O60732 1142 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 APOA4P06727 396 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 NCF1P14598 390 aaPredicted RBP15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 GNSP15586 552 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 JUNDP17535 347 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 NUDT1P36639 197 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 IL2P60568 153 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 ARHGAP8P85298 464 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 CTBSQ01459 385 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 ABRQ12979 859 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 BCL7AQ4VC05 210 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 FBXO48Q5FWF7 155 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 TNFAIP8L3Q5GJ75 292 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 AGBL2Q5U5Z8 902 aa15.11■□□□□ 0.01
PDLIM5-202ENST00000318007 UGT3A1Q6NUS8 523 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms