RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 FAM72CH0Y354 149 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 PRLP01236 227 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 ICAM2P13598 275 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 YBX3P16989 372 aaKnown RBP eCLIP14.24□□□□□ -0.131e-9■■□□□ 12.3
CDT1-201ENST00000301019 GRK3P35626 688 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 TOR2AQ5JU69 321 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 FAM72AQ5TYM5 149 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 FAM72DQ6L9T8 149 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 NOXA1Q86UR1 476 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 FAM72BQ86X60 149 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 CHURC1Q8WUH1 139 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 SYT17Q9BSW7 474 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 MCMBPQ9BTE3 642 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 CDCP1Q9H5V8 836 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 KAT8Q9H7Z6 458 aaKnown RBP14.24□□□□□ -0.13
CDT1-201ENST00000301019 MYOZ2Q9NPC6 264 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 CASS4Q9NQ75 786 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 ZC4H2Q9NQZ6 224 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 ZNF224Q9NZL3 707 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 HCN4Q9Y3Q4 1203 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 GJA3Q9Y6H8 435 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 MEIOCA2RUB1 952 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 POLR1CO15160 346 aaPredicted RBP14.24□□□□□ -0.13
CDT1-201ENST00000301019 RGS20O76081 388 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 MED26O95402 600 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 PRDX3P30048 256 aaKnown RBP14.24□□□□□ -0.13
CDT1-201ENST00000301019 IL12RB1P42701 662 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 MAGEA6P43360 314 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 SMSP52788 366 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 MAPK12P53778 367 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 ISL1P61371 349 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 CLDN10P78369 228 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 FCHO2Q0JRZ9 810 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 LARP4Q71RC2 724 aaKnown RBP eCLIP14.24□□□□□ -0.139e-6■■■■■ 29.6
CDT1-201ENST00000301019 ABI3BPQ7Z7G0 1075 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 PHACTR4Q8IZ21 702 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 EID3Q8N140 333 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 GMCL1P1Q8NEA9 526 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 OR10A6Q8NH74 314 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 TWIST2Q8WVJ9 160 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 DEDD2Q8WXF8 326 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 SIPA1Q96FS4 1042 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 CDK15Q96Q40 435 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 ANKEF1Q9NU02 776 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.24□□□□□ -0.13
CDT1-201ENST00000301019 MAN2B2Q9Y2E5 1009 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 EVPLLA8MZ36 301 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 WNT10BO00744 389 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 SOCS7O14512 581 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 SLC22A2O15244 555 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 CYP2A6P11509 494 aaPredicted RBP14.24□□□□□ -0.13
CDT1-201ENST00000301019 RPS12P25398 132 aaKnown RBP14.24□□□□□ -0.13
CDT1-201ENST00000301019 HOXC5Q00444 222 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 CAPSQ13938 189 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 PLEKHM3Q6ZWE6 761 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 OR8H3Q8N146 312 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 PIK3C3Q8NEB9 887 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 RMDN1Q96DB5 314 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 GPR22Q99680 433 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 RHOJQ9H4E5 214 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 MEAF6Q9HAF1 191 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 ZNF451Q9Y4E5 1061 aa14.24□□□□□ -0.13
CDT1-201ENST00000301019 PNMA8CA0A1B0GUJ8 204 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 OR7A10O76100 309 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 ARHGEF15O94989 841 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 CPB1P15086 417 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 GMPSP49915 693 aaPredicted RBP14.23□□□□□ -0.13
CDT1-201ENST00000301019 CLCN7P51798 805 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 CDC20Q12834 499 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 SEMA3AQ14563 771 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 PTPRCAPQ14761 206 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 CACTIN-AS1Q8N1I8 211 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 OR6P1Q8NGX9 317 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 RIT1Q92963 219 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 TRIM63Q969Q1 353 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 AURKBQ96GD4 344 aaPredicted RBP14.23□□□□□ -0.13
CDT1-201ENST00000301019 ZBED3Q96IU2 234 aaPredicted RBP14.23□□□□□ -0.13
CDT1-201ENST00000301019 ZNF670Q9BS34 389 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 ATP13A2Q9NQ11 1180 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 MALT1Q9UDY8 824 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 TMPRSS11EQ9UL52 423 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 PRKAB1Q9Y478 270 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 TARM1B6A8C7 271 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 CDH5P33151 784 aaPredicted RBP14.23□□□□□ -0.13
CDT1-201ENST00000301019 PSMD8P48556 350 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 NFE2L1Q14494 772 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 FAM98BQ52LJ0 330 aaKnown RBP14.23□□□□□ -0.13
CDT1-201ENST00000301019 SLFN12LQ6IEE8 588 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 BEND5Q7L4P6 421 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 CYP4Z1Q86W10 505 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 RAB43Q86YS6 212 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 C1orf127Q8N9H9 656 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 TRMT61AQ96FX7 289 aaKnown RBP14.23□□□□□ -0.13
CDT1-201ENST00000301019 HOPXQ9BPY8 73 aaPredicted RBP14.23□□□□□ -0.13
CDT1-201ENST00000301019 DNAI2Q9GZS0 605 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 EML4Q9HC35 981 aaKnown RBP14.23□□□□□ -0.13
CDT1-201ENST00000301019 MCCC2Q9HCC0 563 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 MUTYHQ9UIF7 546 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 SIX4Q9UIU6 781 aa14.23□□□□□ -0.13
CDT1-201ENST00000301019 FBXO5Q9UKT4 447 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms