RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MTERF3Q96E29 417 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 MIEF1Q9NQG6 463 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 TRIM17Q9Y577 477 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 COL1A2P08123 1366 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 SLX4Q8IY92 1834 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 ARID1AO14497 2285 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 TBX1O43435 398 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 VPS4BO75351 444 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 DGKAP23743 735 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 KPNA1P52294 538 aaPredicted RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 ZNF135P52742 658 aaPredicted RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 MS4A13Q5J8X5 152 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 FIBCD1Q8N539 461 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 ZNF366Q8N895 744 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 MCFD2Q8NI22 146 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 MRPS31Q92665 395 aaKnown RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 PPP3R2Q96LZ3 170 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 PRICKLE1Q96MT3 831 aaPredicted RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 CHCHD6Q9BRQ6 235 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 ZFYVE1Q9HBF4 777 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 IKZF3Q9UKT9 509 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 RAB23Q9ULC3 237 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 GPR32O75388 356 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 UROSP10746 265 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 EPORP19235 508 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 INAQ16352 499 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 ARMC4Q5T2S8 1044 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 PGM2L1Q6PCE3 622 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 RNF111Q6ZNA4 994 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 LYSMD3Q7Z3D4 306 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 R3HCC1LQ7Z5L2 792 aaKnown RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 ISCA2Q86U28 154 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 KRTCAP2Q8N6L1 136 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 OR4F6Q8NGB9 312 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 APOL4Q9BPW4 351 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 PRDM16Q9HAZ2 1276 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 TMEM30AQ9NV96 361 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 MKS1Q9NXB0 559 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 EHD3Q9NZN3 535 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 INSIG1O15503 277 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 TPST2O60704 377 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 MXD1Q05195 221 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 FAM110CQ1W6H9 321 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 ZNF792Q3KQV3 632 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 GTDC1Q4AE62 458 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 PAGE3Q5JUK9 113 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 DGKKQ5KSL6 1271 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 NOL9Q5SY16 702 aaKnown RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 CCNYL2Q5T2Q4 361 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 PIWIL3Q7Z3Z3 882 aaKnown RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 TRAPPC5Q8IUR0 188 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 ERI1Q8IV48 349 aaKnown RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 SLC13A3Q8WWT9 602 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 TMEM159Q96B96 161 aa13.13□□□□□ -0.31
CASC4-201ENST00000299957 GPBP1L1Q9HC44 474 aaPredicted RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 TNPO3Q9Y5L0 923 aaKnown RBP13.13□□□□□ -0.31
CASC4-201ENST00000299957 BBIP1A8MTZ0 92 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 FFAR2O15552 330 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 CNMDO75829 334 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 RPIAP49247 311 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 GHRHRQ02643 423 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 RAB39AQ14964 217 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 SH2D5Q6ZV89 423 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 UBE2R2Q712K3 238 aaPredicted RBP13.12□□□□□ -0.31
CASC4-201ENST00000299957 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 ZNF614Q8N883 585 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 KCTD13Q8WZ19 329 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 LZICQ8WZA0 190 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 CENPIQ92674 756 aaPredicted RBP13.12□□□□□ -0.31
CASC4-201ENST00000299957 ZBED3Q96IU2 234 aaPredicted RBP13.12□□□□□ -0.31
CASC4-201ENST00000299957 CGREF1Q99674 301 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 TOR3AQ9H497 397 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 TOR4AQ9NXH8 423 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 CDK5RAP2Q96SN8 1893 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 STK16O75716 305 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 S1PR4O95977 384 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 FYNP06241 537 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 ALOX15P16050 662 aaPredicted RBP13.12□□□□□ -0.31
CASC4-201ENST00000299957 PMS2P3Q13401 168 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 ANKDD1AQ495B1 522 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 PIK3R6Q5UE93 754 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 PDE12Q6L8Q7 609 aaKnown RBP13.12□□□□□ -0.31
CASC4-201ENST00000299957 MSANTD2Q6P1R3 559 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 RETREG3Q86VR2 466 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 LSMEM2Q8N112 164 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 CNIH3Q8TBE1 160 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 ROPN1LQ96C74 230 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 NFKBIZQ9BYH8 718 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 ATAD3AQ9NVI7 634 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 MAGEL2Q9UJ55 1249 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 TTC3P53804 2025 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 H3BNX3 289 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 CXCR6O00574 342 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 F2P00734 622 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 GPIP06744 558 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 KCNE1P15382 129 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 FCGRTP55899 365 aa13.12□□□□□ -0.31
CASC4-201ENST00000299957 TPTEP56180 551 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms