RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 NSUN3Q9H649 340 aaKnown RBP13.43□□□□□ -0.26
BCCIP-202ENST00000299130 LHX3Q9UBR4 397 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 FCF1Q9Y324 198 aaKnown RBP13.43□□□□□ -0.26
BCCIP-202ENST00000299130 PCDHB9Q9Y5E1 797 aa13.43□□□□□ -0.26
BCCIP-202ENST00000299130 C2orf78A6NCI8 922 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 UPK1AO00322 258 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 B4GAT1O43505 415 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 CA12O43570 354 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 GUCA1CO95843 209 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 FCGR1AP12314 374 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 TCF3P15923 654 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 GDF5P43026 501 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 GALK1P51570 392 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 NR6A1Q15406 480 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 FXNQ16595 210 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 FBXO22Q8NEZ5 403 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 TNIP2Q8NFZ5 429 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 OR6K2Q8NGY2 324 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 FAM81AQ8TBF8 368 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 ADAMTS16Q8TE57 1224 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 DCUN1D5Q9BTE7 237 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 ADGRE3Q9BY15 652 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 NAA50Q9GZZ1 169 aaKnown RBP13.42□□□□□ -0.26
BCCIP-202ENST00000299130 HEBP1Q9NRV9 189 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 FARSBQ9NSD9 589 aaKnown RBP13.42□□□□□ -0.26
BCCIP-202ENST00000299130 TUBA8Q9NY65 449 aaPredicted RBP13.42□□□□□ -0.26
BCCIP-202ENST00000299130 IL17CQ9P0M4 197 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 ZNF639Q9UID6 485 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 PCDHB7Q9Y5E2 793 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 PRSS21Q9Y6M0 314 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 K7ERQ8 282 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 TAPBPO15533 448 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 ATE1O95260 518 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 SEC24AO95486 1093 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 GALTP07902 379 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 CD9P21926 228 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 POLR2IP36954 125 aaKnown RBP13.42□□□□□ -0.26
BCCIP-202ENST00000299130 PTGER3P43115 390 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 HSPA7P48741 367 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 ADARB1P78563 741 aaKnown RBP13.42□□□□□ -0.26
BCCIP-202ENST00000299130 GTF2H2Q13888 395 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 AP5B1Q2VPB7 878 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 HECTD3Q5T447 861 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 GTF2H2CQ6P1K8 395 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 FRA10AC1Q70Z53 315 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 GPR180Q86V85 440 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 DPP10Q8N608 796 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 CGREF1Q99674 301 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 LTB4R2Q9NPC1 389 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 COMMD8Q9NX08 183 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 NUDT4Q9NZJ9 180 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 VAPAQ9P0L0 249 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 VPS9D1Q9Y2B5 631 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 DHRS7Q9Y394 339 aa13.42□□□□□ -0.26
BCCIP-202ENST00000299130 A0A0J9YVX5 310 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 A0A1B0GVM2 712 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 TYW5A2RUC4 315 aaKnown RBP13.41□□□□□ -0.26
BCCIP-202ENST00000299130 FFAR3O14843 346 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 GPR42O15529 346 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 DFNA5O60443 496 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 ESR1P03372 595 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 UMPSP11172 480 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 HMGA1P17096 107 aaKnown RBP13.41□□□□□ -0.26
BCCIP-202ENST00000299130 ELK4P28324 431 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 RANBP1P43487 201 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 TRAF3Q13114 568 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 KIAA0040Q15053 153 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 PCBP2Q15366 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
BCCIP-202ENST00000299130 ABRAXAS1Q6UWZ7 409 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 FAM151BQ6UXP7 276 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 USP51Q70EK9 711 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 RNF180Q86T96 592 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 PATL1Q86TB9 770 aaKnown RBP13.41□□□□□ -0.26
BCCIP-202ENST00000299130 ITIH5Q86UX2 942 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 PROSER1Q86XN7 944 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 LRRC43Q8N309 656 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 CLDN19Q8N6F1 224 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 DRAXINQ8NBI3 349 aaPredicted RBP13.41□□□□□ -0.26
BCCIP-202ENST00000299130 BHMTQ93088 406 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 NSMCE2Q96MF7 247 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 TTPALQ9BTX7 342 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 CIPCQ9C0C6 399 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 IPPKQ9H8X2 491 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 SMPD4Q9NXE4 827 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 PTBP2Q9UKA9 531 aaKnown RBP13.41□□□□□ -0.26
BCCIP-202ENST00000299130 UTS2RQ9UKP6 389 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 ZNF711Q9Y462 761 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 CCL27Q9Y4X3 112 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 PCDHB3Q9Y5E6 796 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 H7C0S8 307 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 GAPDHSO14556 408 aaPredicted RBP13.41□□□□□ -0.26
BCCIP-202ENST00000299130 SHMT2P34897 504 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 OR1D2P34982 312 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 GGT5P36269 586 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 DCTN2Q13561 401 aaKnown RBP13.41□□□□□ -0.26
BCCIP-202ENST00000299130 PTGR1Q14914 329 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 RAB39AQ14964 217 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 NKG7Q16617 165 aa13.41□□□□□ -0.26
BCCIP-202ENST00000299130 AASDHQ4L235 1098 aaPredicted RBP13.41□□□□□ -0.26
BCCIP-202ENST00000299130 ADGRF1Q5T601 910 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms