RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 MYL2P10916 166 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 FGF3P11487 239 aaPredicted RBP24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 BGNP21810 368 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 PXNP49023 591 aaPredicted RBP24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 CES4AQ5XG92 561 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 C11orf96Q7Z7L8 435 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 RAB3IL1Q8TBN0 382 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 LRRC8CQ8TDW0 803 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 ELMO1Q92556 727 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 FOXJ1Q92949 421 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 GPR174Q9BXC1 333 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 PCYT1BQ9Y5K3 369 aaPredicted RBP24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 PLXND1Q9Y4D7 1925 aa24.21■■□□□ 1.47
GTF2A1-201ENST00000298173 C17orf113A0A1B0GUU1 675 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 POM121BA6NF01 834 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 GPR89AB7ZAQ6 455 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 RRP9O43818 475 aaKnown RBP24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 GPR89BP0CG08 455 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 ENO3P13929 434 aaPredicted RBP24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 MTHFD2P13995 350 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 GTF2H3Q13889 308 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 TSNQ15631 228 aaKnown RBP24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 PIWIL4Q7Z3Z4 852 aaKnown RBP24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 TRIM42Q8IWZ5 723 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 FAM160A2Q8N612 972 aaPredicted RBP24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 TMEM145Q8NBT3 493 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 ASZ1Q8WWH4 475 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 CHMP6Q96FZ7 201 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 HS3ST3A1Q9Y663 406 aa24.2■■□□□ 1.46
GTF2A1-201ENST00000298173 SLC5A10A0PJK1 596 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 BTN3A1O00481 513 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 KERAO60938 352 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 GSTM1P09488 218 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 CCR3P51677 355 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 GSTM4Q03013 218 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 HSPA14Q0VDF9 509 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 TJAP1Q5JTD0 557 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 XKR5Q6UX68 686 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 BIRC7Q96CA5 298 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 SLC17A4Q9Y2C5 497 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 ANKRD12Q6UB98 2062 aa24.19■■□□□ 1.46
GTF2A1-201ENST00000298173 FPGTO14772 594 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 TRIM13O60858 407 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 FUCA1P04066 466 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 ATP5F1P24539 256 aaPredicted RBP24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 CLDN2P57739 230 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 PFN3P60673 137 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 TERF2Q15554 542 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 CHI3L2Q15782 390 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 TRAPPC5Q8IUR0 188 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 VRK3Q8IV63 474 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 LRRC34Q8IZ02 419 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 MYO1HQ8N1T3 1032 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 MYOCQ99972 504 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 DNMT3AQ9Y6K1 912 aaPredicted RBP24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 EML5Q05BV3 1969 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 NPEPPSL1A6NEC2 478 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 POP7O75817 140 aaKnown RBP24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 CEACAM5P06731 702 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 BOP1Q14137 746 aaKnown RBP24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 DOK6Q6PKX4 331 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 SBSNQ6UWP8 590 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 NEK10Q6ZWH5 1172 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 SCARF2Q96GP6 870 aaPredicted RBP24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 ORAI3Q9BRQ5 295 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 DMTF1Q9Y222 760 aa24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.18■■□□□ 1.46
GTF2A1-201ENST00000298173 CACNA1IQ9P0X4 2223 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 NCOR1O75376 2440 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 NEMP2A6NFY4 417 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 FSBPO95073 299 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 MPC1LP0DKB6 136 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 NEFHP12036 1026 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 AOC1P19801 751 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 HOXA6P31267 233 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 AKT2P31751 481 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 NUDT1P36639 197 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 PRKAA2P54646 552 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 KIAA1024LP59773 190 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 DNAJB13P59910 316 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 GABPB1Q06547 395 aaPredicted RBP24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 LIPMQ5VYY2 423 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 GCNT7Q6ZNI0 430 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 RASGRP3Q8IV61 690 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 SLCO1B3Q9NPD5 702 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 CA5BQ9Y2D0 317 aa24.17■■□□□ 1.46
GTF2A1-201ENST00000298173 A8MT66 165 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 PRAMEF26H0Y7S4 382 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 H0Y8X5 98 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 CACNB4O00305 520 aaPredicted RBP24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 DCXO43602 365 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 KLK8O60259 260 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 TPBGLP0DKB5 382 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 ARHGAP8P85298 464 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 BST1Q10588 318 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 ATG16L1Q676U5 607 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 ZCCHC23Q6ZST2 131 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 LRRTM4Q86VH4 590 aa24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 LILRA3Q8N6C8 439 aaPredicted RBP24.16■■□□□ 1.46
GTF2A1-201ENST00000298173 OR2L2Q8NH16 312 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms