RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ZDHHC3Q9NYG2 299 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 ADGRE2Q9UHX3 823 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 ARL5AQ9Y689 179 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 MGRN1O60291 552 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 KERAO60938 352 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 ZNF623O75123 536 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 RB1P06400 928 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 HSD17B2P37059 387 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 RANBP1P43487 201 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 PRR5P85299 388 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 CLEC6AQ6EIG7 209 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 CDKN2AIPNLQ96HQ2 116 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 ZNF354BQ96LW1 612 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 NPAS2Q99743 824 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 ZSCAN5AQ9BUG6 496 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 NFKBIL1Q9UBC1 381 aaPredicted RBP18.3■□□□□ 0.52
PCDH1-201ENST00000287008 UGT2B17O75795 530 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 IL1R2P27930 398 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 ACVRL1P37023 503 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 LBX1P52954 281 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 RGS8P57771 180 aaPredicted RBP18.3■□□□□ 0.52
PCDH1-201ENST00000287008 BEND5Q7L4P6 421 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 OR10H5Q8NGA6 315 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 PNPT1Q8TCS8 783 aaKnown RBP18.3■□□□□ 0.52
PCDH1-201ENST00000287008 ACSS2Q9NR19 701 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 SIX4Q9UIU6 781 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 GATMP50440 423 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 KLHL12Q53G59 568 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 TMEM164Q5U3C3 297 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.3■□□□□ 0.52
PCDH1-201ENST00000287008 GAL3ST4Q96RP7 486 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 SH3GL3Q99963 347 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 NUAK2Q9H093 628 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 ABI3Q9P2A4 366 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 CNOT6Q9ULM6 557 aaKnown RBP18.3■□□□□ 0.52
PCDH1-201ENST00000287008 PRKAB1Q9Y478 270 aa18.3■□□□□ 0.52
PCDH1-201ENST00000287008 COL1A1P02452 1464 aaPredicted RBP18.29■□□□□ 0.52
PCDH1-201ENST00000287008 KIAA0100Q14667 2235 aaKnown RBP18.29■□□□□ 0.52
PCDH1-201ENST00000287008 ZBTB6Q15916 424 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 GK5Q6ZS86 529 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 AMIGO2Q86SJ2 522 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 UBR7Q8N806 425 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 DCAF4L2Q8NA75 395 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 C11orf65Q8NCR3 313 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 ESAMQ96AP7 390 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 OTUB2Q96DC9 234 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 AGAP2Q99490 1192 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 AJAP1Q9UKB5 411 aaPredicted RBP18.29■□□□□ 0.52
PCDH1-201ENST00000287008 GMEB2Q9UKD1 530 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 MKL2Q9ULH7 1088 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 TRIM43BA6NCK2 446 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 EFCAB10A6NFE3 127 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 CCNA2P20248 432 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 SLC1A2P43004 574 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 TRIM32Q13049 653 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 ITPRIPL2Q3MIP1 535 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 TRMT10BQ6PF06 316 aaKnown RBP18.29■□□□□ 0.52
PCDH1-201ENST00000287008 OLFML1Q6UWY5 402 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 ZNF280BQ86YH2 543 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 AZIN2Q96A70 460 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 C7orf26Q96N11 449 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 SPRTNQ9H040 489 aaPredicted RBP18.29■□□□□ 0.52
PCDH1-201ENST00000287008 RUVBL1Q9Y265 456 aaKnown RBP18.29■□□□□ 0.52
PCDH1-201ENST00000287008 SH3GLB1Q9Y371 365 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 NR2E1Q9Y466 385 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 LOC100506127A0A0U1RQW1 187 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 RBM47A0AV96 593 aaKnown RBP18.29■□□□□ 0.52
PCDH1-201ENST00000287008 COX10Q12887 443 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 IZUMO1Q8IYV9 350 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 ZMIZ2Q8NF64 920 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 MIEF2Q96C03 454 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 DCUN1D5Q9BTE7 237 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 ALDH4A1P30038 563 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 TRAF3Q13114 568 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 POMZP3Q6PJE2 187 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 TRAF7Q6Q0C0 670 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 FAM180AQ6UWF9 173 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 LYSMD3Q7Z3D4 306 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 VANGL1Q8TAA9 524 aaPredicted RBP18.29■□□□□ 0.52
PCDH1-201ENST00000287008 RTKNQ9BST9 563 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 EBF3Q9H4W6 596 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 MRPS30Q9NP92 439 aaKnown RBP18.29■□□□□ 0.52
PCDH1-201ENST00000287008 NECTIN3Q9NQS3 549 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 COPS7AQ9UBW8 275 aa18.29■□□□□ 0.52
PCDH1-201ENST00000287008 CPED1A4D0V7 1026 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 ALPIP09923 528 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 LRRC32Q14392 662 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 AAK1Q2M2I8 961 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 MYLK3Q32MK0 819 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 NCBP2-AS2Q69YL0 99 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 LRRTM4Q86VH4 590 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 SFRP1Q8N474 314 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 CYP2S1Q96SQ9 504 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 PCYT2Q99447 389 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 OLFM1Q99784 485 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 TDRD1Q9BXT4 1180 aaKnown RBP18.28■□□□□ 0.52
PCDH1-201ENST00000287008 GEMIN8Q9NWZ8 242 aaKnown RBP18.28■□□□□ 0.52
PCDH1-201ENST00000287008 PTGFRNQ9P2B2 879 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 STYXL1Q9Y6J8 313 aa18.28■□□□□ 0.52
PCDH1-201ENST00000287008 FAM86C2PA6NEL3 165 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms