RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SPTLC3Q9NUV7 552 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 IL17CQ9P0M4 197 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 TLK1Q9UKI8 766 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 PCDHGA6Q9Y5G7 932 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 SHANK1Q9Y566 2161 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 SPTBN1Q01082 2364 aaKnown RBP8.77□□□□□ -1.01
TPM3-201ENST00000271850 SPTBP11277 2137 aa8.77□□□□□ -1.01
TPM3-201ENST00000271850 GOLGA6L22H0YM25 854 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 APOL1O14791 398 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 BUD23O43709 281 aaKnown RBP8.76□□□□□ -1.01
TPM3-201ENST00000271850 VEGFDO43915 354 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 CREG1O75629 220 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 KRT1P04264 644 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 EBLN1P0CF75 366 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 AMD1P17707 334 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 NFKB1P19838 968 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 HMGCLP35914 325 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 CDKN2BP42772 138 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 MARCKSL1P49006 195 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 WNT3AP56704 352 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 DYNLT1P63172 113 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 DMPKQ09013 629 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 TMEM115Q12893 351 aaPredicted RBP8.76□□□□□ -1.01
TPM3-201ENST00000271850 MSLNQ13421 630 aaPredicted RBP8.76□□□□□ -1.01
TPM3-201ENST00000271850 OLIG2Q13516 323 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 DNASE1L3Q13609 305 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 NFE2L1Q14494 772 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 IL11RAQ14626 422 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 CHRNA6Q15825 494 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 RPE65Q16518 533 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.76□□□□□ -1.01
TPM3-201ENST00000271850 SIRPB2Q5JXA9 342 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 PRAMEF17Q5VTA0 474 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 CACHD1Q5VU97 1274 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 TCTN3Q6NUS6 607 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 IRGCQ6NXR0 463 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 FBXO38Q6PIJ6 1188 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 FAM151BQ6UXP7 276 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 TRAPPC5Q8IUR0 188 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 MAP7D3Q8IWC1 876 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 RHOT1Q8IXI2 618 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 BEND7Q8N7W2 519 aaPredicted RBP8.76□□□□□ -1.01
TPM3-201ENST00000271850 DDHD1Q8NEL9 900 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 CTNNBL1Q8WYA6 563 aaPredicted RBP8.76□□□□□ -1.01
TPM3-201ENST00000271850 MAP3K3Q99759 626 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 EFHD1Q9BUP0 239 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 GPR63Q9BZJ6 419 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 GOLPH3Q9H4A6 298 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 ACTL8Q9H568 366 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 C10orf88Q9H8K7 445 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 PSMD13Q9UNM6 376 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 KCTD3Q9Y597 815 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 CFAP20Q9Y6A4 193 aaKnown RBP8.76□□□□□ -1.01
TPM3-201ENST00000271850 NOTCH2Q04721 2471 aa8.76□□□□□ -1.01
TPM3-201ENST00000271850 A0A0A6YYK5 440 aaPredicted RBP8.75□□□□□ -1.01
TPM3-201ENST00000271850 SSU72P8A0A1W2PR75 194 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 CDC14CA4D256 554 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 OR2AG2A6NM03 316 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 DDX3YO15523 660 aaKnown RBP8.75□□□□□ -1.01
TPM3-201ENST00000271850 KATNA1O75449 491 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 RASSF9O75901 435 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 NTRK1P04629 796 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 PMS2P54278 862 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 MC1RQ01726 317 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 KLRB1Q12918 225 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 CHAF1BQ13112 559 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 SEMA5AQ13591 1074 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 PDK1Q15118 436 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 ZNF789Q5FWF6 425 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 GPRC6AQ5T6X5 926 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 ZNF517Q6ZMY9 492 aaPredicted RBP8.75□□□□□ -1.01
TPM3-201ENST00000271850 PPP1R3BQ86XI6 285 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 RFX6Q8HWS3 928 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 LURAP1LQ8IV03 231 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 RASGRP3Q8IV61 690 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 TRIM48Q8IWZ4 208 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 ZNF567Q8N184 647 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 SLC25A41Q8N5S1 370 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 AVL9Q8NBF6 648 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 DTX3LQ8TDB6 740 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 ADAMTS17Q8TE56 1095 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 STAMBPL1Q96FJ0 436 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 ZNF830Q96NB3 372 aaPredicted RBP8.75□□□□□ -1.01
TPM3-201ENST00000271850 INSM2Q96T92 566 aaPredicted RBP8.75□□□□□ -1.01
TPM3-201ENST00000271850 MLXIPLQ9NP71 852 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 LNPEPQ9UIQ6 1025 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 TFR2Q9UP52 801 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 POLHQ9Y253 713 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 FER1L5A0AVI2 2057 aa8.75□□□□□ -1.01
TPM3-201ENST00000271850 PRRC2CQ9Y520 2896 aaKnown RBP8.75□□□□□ -1.01
TPM3-201ENST00000271850 OR5K3A6NET4 321 aa8.74□□□□□ -1.01
TPM3-201ENST00000271850 PPP1R12AO14974 1030 aaPredicted RBP8.74□□□□□ -1.01
TPM3-201ENST00000271850 POP7O75817 140 aaKnown RBP8.74□□□□□ -1.01
TPM3-201ENST00000271850 CAPN1P07384 714 aa8.74□□□□□ -1.01
TPM3-201ENST00000271850 GP1BBP13224 206 aa8.74□□□□□ -1.01
TPM3-201ENST00000271850 COMTP21964 271 aa8.74□□□□□ -1.01
TPM3-201ENST00000271850 IDSP22304 550 aa8.74□□□□□ -1.01
TPM3-201ENST00000271850 SPAM1P38567 509 aa8.74□□□□□ -1.01
TPM3-201ENST00000271850 ARCN1P48444 511 aaKnown RBP8.74□□□□□ -1.01
TPM3-201ENST00000271850 KPNA2P52292 529 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms