RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ELP6Q0PNE2 266 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 RASSF6Q6ZTQ3 369 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 PTPN18Q99952 460 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 HMGXB4Q9UGU5 601 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 IKZF2Q9UKS7 526 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 MAFBQ9Y5Q3 323 aaPredicted RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 IRAK3Q9Y616 596 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 FAM86C2PA6NEL3 165 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 FUT4P22083 530 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 DNASE1L2Q92874 299 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 BHLHE41Q9C0J9 482 aaPredicted RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 SLC25A51Q9H1U9 297 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 MALT1Q9UDY8 824 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 FAM172BPA6NC97 362 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 CPSF4LA6NMK7 179 aaKnown RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 NPHS1O60500 1241 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 TSPAN9O75954 239 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 PSMA1P25786 263 aaKnown RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 CYP1B1Q16678 543 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 TYSND1Q2T9J0 566 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 ZNF697Q5TEC3 545 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 BICRALQ6AI39 1079 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 PDPRQ8NCN5 879 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 B3GALT6Q96L58 329 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 CYP2S1Q96SQ9 504 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 NIFKQ9BYG3 293 aaKnown RBP13.23□□□□□ -0.29
NEK4-201ENST00000233027 TOR3AQ9H497 397 aa13.23□□□□□ -0.29
NEK4-201ENST00000233027 TEX28O15482 410 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 TULP3O75386 442 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 PGRP06401 933 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 SNAP47Q5SQN1 464 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 ZDHHC21Q8IVQ6 265 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 CRYBG2Q8N1P7 616 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 CADM2Q8N3J6 435 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 TRPV3Q8NET8 790 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 POP5Q969H6 163 aaKnown RBP13.22□□□□□ -0.29
NEK4-201ENST00000233027 MIOSQ9NXC5 875 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 DTLQ9NZJ0 730 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 CNTN6Q9UQ52 1028 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 SLC27A6Q9Y2P4 619 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 A0A1W2PRG6 482 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 CXorf49A8MYA2 514 aaPredicted RBP13.22□□□□□ -0.29
NEK4-201ENST00000233027 CFHP08603 1231 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 GRIA1P42261 906 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 TCEAL5Q5H9L2 206 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 PLPP4Q5VZY2 271 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 CFAP206Q8IYR0 622 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 ZNF248Q8NDW4 579 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 TRPV1Q8NER1 839 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 EZH1Q92800 747 aaPredicted RBP13.22□□□□□ -0.29
NEK4-201ENST00000233027 FAM210AQ96ND0 272 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 CDADC1Q9BWV3 514 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 EBF2Q9HAK2 575 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 WRAP73Q9P2S5 460 aaPredicted RBP13.22□□□□□ -0.29
NEK4-201ENST00000233027 SCAMP1O15126 338 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 CXCL14O95715 111 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 IFNW1P05000 195 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 SEMG2Q02383 582 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 PRKD1Q15139 912 aaPredicted RBP13.22□□□□□ -0.29
NEK4-201ENST00000233027 FAM174BQ3ZCQ3 159 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 LCN1P1Q5VSP4 162 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 DCAKDQ8WVC6 231 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 TUBGCP5Q96RT8 1024 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 GULP1Q9UBP9 304 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 ZNF214Q9UL59 606 aaPredicted RBP13.22□□□□□ -0.29
NEK4-201ENST00000233027 SLIT3O75094 1523 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 OR51F1A6NGY5 319 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 INSIG1O15503 277 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 CHST10O43529 356 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 CCNB2O95067 398 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 PGLSO95336 258 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 C22orf31O95567 290 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 PRKAR2AP13861 404 aaKnown RBP13.22□□□□□ -0.29
NEK4-201ENST00000233027 CHIT1Q13231 466 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 KBTBD7Q8WVZ9 684 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 SNX27Q96L92 541 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 TSPAN18Q96SJ8 248 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 ADH1AP07327 375 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 CCNFP41002 786 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 ASMTP46597 345 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 PSMD8P48556 350 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 SUZ12Q15022 739 aaKnown RBP13.22□□□□□ -0.29
NEK4-201ENST00000233027 LRRC73Q5JTD7 316 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 SVOPLQ8N434 492 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 TSEN15Q8WW01 171 aaKnown RBP13.22□□□□□ -0.29
NEK4-201ENST00000233027 TBC1D17Q9HA65 648 aa13.22□□□□□ -0.29
NEK4-201ENST00000233027 POLR3BQ9NW08 1133 aaPredicted RBP13.22□□□□□ -0.29
NEK4-201ENST00000233027 MAGEB17A8MXT2 336 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 WASP42768 502 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 CREMQ03060 361 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 CCDC80Q76M96 950 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 FBXW11Q9UKB1 542 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 NEMP2A6NFY4 417 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 SCELO95171 688 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 HTR1BP28222 390 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 HADHBP55084 474 aaKnown RBP13.21□□□□□ -0.29
NEK4-201ENST00000233027 TAS2R39P59534 338 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 SMARCB1Q12824 385 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 MED27Q6P2C8 311 aa13.21□□□□□ -0.29
NEK4-201ENST00000233027 NAPRTQ6XQN6 538 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms