RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 LYVE1Q9Y5Y7 322 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 CCDC88AQ3V6T2 1871 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 SMCHD1A6NHR9 2005 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 DYTNA2CJ06 578 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 TCAF2A6NFQ2 919 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 MYL12BO14950 172 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 SUV39H1O43463 412 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 OR10H3O60404 316 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 OR1I1O60431 355 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 TRAP1Q12931 704 aaKnown RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 HERC3Q15034 1050 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 PDE12Q6L8Q7 609 aaKnown RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 VANGL1Q8TAA9 524 aaPredicted RBP13.57□□□□□ -0.24
NFKB1-201ENST00000226574 TMEM40Q8WWA1 233 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 ACTR3BQ9P1U1 418 aa13.57□□□□□ -0.24
NFKB1-201ENST00000226574 IDH3BO43837 385 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 TPST2O60704 377 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 SERPINA4P29622 427 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 CORO1AP31146 461 aaKnown RBP13.56□□□□□ -0.24
NFKB1-201ENST00000226574 CPOXP36551 454 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 TRIM32Q13049 653 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 RAB39AQ14964 217 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 ACOX1Q15067 660 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 COLEC12Q5KU26 742 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 TRIQKQ629K1 86 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 UGT2A3Q6UWM9 527 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 HID1Q8IV36 788 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 UXS1Q8NBZ7 420 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 ST13P5Q8NFI4 369 aaPredicted RBP13.56□□□□□ -0.24
NFKB1-201ENST00000226574 RNFT2Q96EX2 444 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 TDRD1Q9BXT4 1180 aaKnown RBP13.56□□□□□ -0.24
NFKB1-201ENST00000226574 HIPK3Q9H422 1215 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 CCSER2Q9H7U1 834 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 MTMR10Q9NXD2 777 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 SMIM30A4D0T7 59 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 H7C4K7 107 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 AIREO43918 545 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 UGT2B4P06133 528 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 RAP2AP10114 183 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 VBP1P61758 197 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 TOP3AQ13472 1001 aaPredicted RBP13.56□□□□□ -0.24
NFKB1-201ENST00000226574 NAE1Q13564 534 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 TGFBIQ15582 683 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 NANOGP8Q6NSW7 305 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 SERPINA9Q86WD7 417 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 TTC29Q8NA56 475 aaPredicted RBP13.56□□□□□ -0.24
NFKB1-201ENST00000226574 COL26A1Q96A83 441 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 OMA1Q96E52 524 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 ITCHQ96J02 903 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 CITED4Q96RK1 184 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 AARSD1Q9BTE6 412 aaKnown RBP13.56□□□□□ -0.24
NFKB1-201ENST00000226574 TOR3AQ9H497 397 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 NANOGQ9H9S0 305 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 GNPTGQ9UJJ9 305 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 CACNA1CQ13936 2221 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 A0A0J9YVX5 310 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 HMX2A2RU54 273 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 DCLK1O15075 740 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 FAM189A1O60320 539 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 GLUD1P00367 558 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 CDKN2DP55273 166 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 ERVK-8P63133 956 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 SH3BP2P78314 561 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 NPTX1Q15818 432 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 ZNF678Q5SXM1 525 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 INTS11Q5TA45 600 aaKnown RBP13.56□□□□□ -0.24
NFKB1-201ENST00000226574 CENPSQ8N2Z9 138 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 MZB1Q8WU39 189 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 RAB2BQ8WUD1 216 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 KCNS3Q9BQ31 491 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 RPS6KA6Q9UK32 745 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 KLHL20Q9Y2M5 609 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 DNAJC15Q9Y5T4 150 aa13.56□□□□□ -0.24
NFKB1-201ENST00000226574 A0A0D9SEW6 157 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 A0A1B0GTW7 788 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 A0A1W2PP18 115 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 PRR23D1E9PI22 279 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-201ENST00000226574 IGSF6O95976 241 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 PRR23D2P0DMB1 279 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-201ENST00000226574 ELNP15502 786 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 DENND5AQ6IQ26 1287 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 RBFAQ8N0V3 343 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 LILRA2Q8N149 483 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-201ENST00000226574 MYOCQ99972 504 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 POLR3BQ9NW08 1133 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-201ENST00000226574 ASB3Q9Y575 518 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 H3BNH8 94 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 TRBC1P01850 177 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 TSPAN19P0C672 248 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 TNNI3P19429 210 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 HOXA11P31270 313 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-201ENST00000226574 PLEKHM3Q6ZWE6 761 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 ZNF534Q76KX8 674 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 MAVSQ7Z434 540 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 EPHX4Q8IUS5 362 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 CMTR2Q8IYT2 770 aaKnown RBP13.55□□□□□ -0.24
NFKB1-201ENST00000226574 SIX5Q8N196 739 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 FIBCD1Q8N539 461 aa13.55□□□□□ -0.24
NFKB1-201ENST00000226574 KBTBD7Q8WVZ9 684 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms