RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 PRICKLE1Q96MT3 831 aaPredicted RBP14.75□□□□□ -0.05
UBE2D4-201ENST00000222402 CRISPLD1Q9H336 500 aa14.75□□□□□ -0.05
UBE2D4-201ENST00000222402 AIG1Q9NVV5 245 aa14.75□□□□□ -0.05
UBE2D4-201ENST00000222402 ARVCFO00192 962 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 SLC28A1O00337 649 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 PEX11BO96011 259 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 INHAP05111 366 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 UMPSP11172 480 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 GRIA2P42262 883 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 NFKB2Q00653 900 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 IL5RAQ01344 420 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 OCA2Q04671 838 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 TAS1R1Q7RTX1 841 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 GOLGA7Q7Z5G4 137 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 HORMAD1Q86X24 394 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 DGCR6LQ9BY27 220 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 MUC13Q9H3R2 512 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 PCTPQ9UKL6 214 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 YIPF1Q9Y548 306 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 C2orf78A6NCI8 922 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 TMEM189-UBE2V1I3L0A0 370 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 CLDN7O95471 211 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 PENKP01210 267 aaPredicted RBP14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 HOXC8P31273 242 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 HTR6P50406 440 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 RAD23AP54725 363 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 EEFSECP57772 596 aaKnown RBP14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 LRRC73Q5JTD7 316 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 PAGE3Q5JUK9 113 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 GRAMD4Q6IC98 578 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 USP45Q70EL2 814 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 ANKRD46Q86W74 232 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 C8orf59Q8N0T1 100 aaPredicted RBP14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 LIX1Q8N485 282 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 ZNF558Q96NG5 402 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 CGREF1Q99674 301 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 ZIM2Q9NZV7 527 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 CFAP97Q9P2B7 532 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 PLXNA1Q9UIW2 1896 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 IGLV3-10A0A075B6K4 115 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 ADAM12O43184 909 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 PBLDP30039 288 aaPredicted RBP14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 AP1S1P61966 158 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 ZNF621Q6ZSS3 439 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 DNAJB7Q7Z6W7 309 aaPredicted RBP14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 TMEM132CQ8N3T6 1108 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 TMEM199Q8N511 208 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 SLC13A3Q8WWT9 602 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 BIRC7Q96CA5 298 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 SPATA17Q96L03 361 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 HIPK3Q9H422 1215 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 ATXN10Q9UBB4 475 aa14.74□□□□□ -0.05
UBE2D4-201ENST00000222402 TCRBV3S1A0A5B6 114 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 DYTNA2CJ06 578 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 K7ERQ8 282 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 WDR47O94967 919 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 APLP1P51693 650 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 ZNF140P52738 457 aaPredicted RBP14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 SNRPD1P62314 119 aaKnown RBP14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 LSAMPQ13449 338 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 MED8Q96G25 268 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 SRRDQ9UH36 339 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 VPS51Q9UID3 782 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 SLC25A13Q9UJS0 675 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 PCDHGB4Q9UN71 923 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 ZNF197O14709 1029 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 TRIM24O15164 1050 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 MAPK1P28482 360 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 OXTRP30559 389 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 CAPGP40121 348 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 PPP3CCP48454 512 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 RPIAP49247 311 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 FOXM1Q08050 763 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 PPP4R4Q6NUP7 873 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 GALNT7Q86SF2 657 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 SFRP1Q8N474 314 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 MCOLN3Q8TDD5 553 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 SLC30A3Q99726 388 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 CXorf21Q9HAI6 301 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 NEU3Q9UQ49 428 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 LOC285556D6RIA3 1793 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 MTHFD2P13995 350 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 SPAM1P38567 509 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 GALK1P51570 392 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 PTGR1Q14914 329 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 TTC23Q5W5X9 447 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 UBE2R2Q712K3 238 aaPredicted RBP14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 CMTR2Q8IYT2 770 aaKnown RBP14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 ZNF385DQ9H6B1 395 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 SMOXQ9NWM0 555 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 PCDHGB5Q9Y5G0 923 aa14.73□□□□□ -0.05
UBE2D4-201ENST00000222402 UGT2B4P06133 528 aa14.72□□□□□ -0.05
UBE2D4-201ENST00000222402 ZNF26P17031 533 aaPredicted RBP14.72□□□□□ -0.05
UBE2D4-201ENST00000222402 ITPKAP23677 461 aa14.72□□□□□ -0.05
UBE2D4-201ENST00000222402 MAPK8P45983 427 aa14.72□□□□□ -0.05
UBE2D4-201ENST00000222402 ERVPABLB-1P60509 514 aa14.72□□□□□ -0.05
UBE2D4-201ENST00000222402 IRF8Q02556 426 aa14.72□□□□□ -0.05
UBE2D4-201ENST00000222402 NOGQ13253 232 aa14.72□□□□□ -0.05
UBE2D4-201ENST00000222402 POM121L1PQ3SYA9 428 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms