RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 PDPRQ8NCN5 879 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 OR13F1Q8NGS4 319 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 METTL6Q8TCB7 284 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 PNPT1Q8TCS8 783 aaKnown RBP17.04■□□□□ 0.32
USB1-201ENST00000219281 TANKQ92844 425 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 BORCS5Q969J3 196 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 ITFG2Q969R8 447 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 ING2Q9H160 280 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 TBCCD1Q9NVR7 557 aa17.04■□□□□ 0.32
USB1-201ENST00000219281 UBA2Q9UBT2 640 aaPredicted RBP17.04■□□□□ 0.32
USB1-201ENST00000219281 EVLQ9UI08 416 aaPredicted RBP17.04■□□□□ 0.32
USB1-201ENST00000219281 A0A0U1RQS6 177 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 A0A1W2PQ45 241 aaPredicted RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 A0A1W2PQY0 241 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 FAM92AA1XBS5 289 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 TRIM64BA6NI03 449 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 IQCF5A8MTL0 148 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 DEAF1O75398 565 aaPredicted RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 RSL1D1O76021 490 aaKnown RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 CPNE6O95741 557 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 ANXA6P08133 673 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 ZNF182P17025 639 aaPredicted RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 SLC6A4P31645 630 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 GRSF1Q12849 480 aaKnown RBP eCLIP17.03■□□□□ 0.32
USB1-201ENST00000219281 TRAF2Q12933 501 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 DAG1Q14118 895 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 GPNMBQ14956 572 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 TGFBIQ15582 683 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 ZNF829Q3KNS6 432 aaPredicted RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 CTXN3Q4LDR2 81 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 FAM98BQ52LJ0 330 aaKnown RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 CYP20A1Q6UW02 462 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 ZC3H7AQ8IWR0 971 aaKnown RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 CAPNS2Q96L46 248 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 FAM210AQ96ND0 272 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 PSKH2Q96QS6 385 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 CGREF1Q99674 301 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 ACTL8Q9H568 366 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 HEBP1Q9NRV9 189 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 PCDHGC4Q9Y5F7 938 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 PLXNA3P51805 1871 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 E5RI56 91 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 TULP3O75386 442 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 ALPLP05186 524 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 RAP2AP10114 183 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 THRBP10828 461 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 MBL2P11226 248 aaPredicted RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 LPOP22079 712 aaPredicted RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 UGT1A1P22309 533 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 UGT1A4P22310 534 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 MAP4P27816 1152 aaKnown RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 UGT1A3P35503 534 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 UGT1A5P35504 534 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 MTHFRP42898 656 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 NFATC3Q12968 1075 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 NR6A1Q15406 480 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 FAM126BQ8IXS8 530 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 EFHBQ8N7U6 833 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 TTC16Q8NEE8 873 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 RAET1EQ8TD07 263 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 ADNPQ9H2P0 1102 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 SCUBE2Q9NQ36 999 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 ZNF510Q9Y2H8 683 aa17.03■□□□□ 0.32
USB1-201ENST00000219281 POLR3HQ9Y535 204 aaPredicted RBP17.03■□□□□ 0.32
USB1-201ENST00000219281 TMEM189-UBE2V1I3L0A0 370 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 KATNA1O75449 491 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 CNPP09543 421 aaKnown RBP17.02■□□□□ 0.32
USB1-201ENST00000219281 GGT1P19440 569 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 MAGEA11P43364 429 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 TTPAP49638 278 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 C21orf59P57076 290 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 CHRNB3Q05901 458 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 BROXQ5VW32 411 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 SNX19Q92543 992 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 ACDQ96AP0 544 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 CNDP2Q96KP4 475 aaKnown RBP17.02■□□□□ 0.32
USB1-201ENST00000219281 SEPT5Q99719 369 aaPredicted RBP17.02■□□□□ 0.32
USB1-201ENST00000219281 C17orf80Q9BSJ5 609 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 TDRD1Q9BXT4 1180 aaKnown RBP17.02■□□□□ 0.32
USB1-201ENST00000219281 MAGEH1Q9H213 219 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 CARS2Q9HA77 564 aaKnown RBP17.02■□□□□ 0.32
USB1-201ENST00000219281 TMEM45AQ9NWC5 275 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 TMEM9Q9P0T7 183 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 VPS9D1Q9Y2B5 631 aa17.02■□□□□ 0.32
USB1-201ENST00000219281 ZFP37Q9Y6Q3 630 aaPredicted RBP17.02■□□□□ 0.32
USB1-201ENST00000219281 PRSS23O95084 383 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 INHBBP09529 407 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 CCNA2P20248 432 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 HOXD10P28358 340 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 RING1Q06587 406 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 PWP1Q13610 501 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 AP5B1Q2VPB7 878 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 TAS2R42Q7RTR8 314 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 FAM86B1Q8N7N1 296 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 PDZD8Q8NEN9 1154 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 PXYLP1Q8TE99 480 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 FIG4Q92562 907 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 SGCDQ92629 289 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 PLEKHA8Q96JA3 519 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 TSEN34Q9BSV6 310 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms