RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 YTHDF1Q9BYJ9 559 aaKnown RBP13.85□□□□□ -0.19
USH1C-201ENST00000005226 AP5M1Q9H0R1 490 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 RAD21L1Q9H4I0 556 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 ERGIC3Q9Y282 383 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 GIT1Q9Y2X7 761 aa13.85□□□□□ -0.19
USH1C-201ENST00000005226 E2F3O00716 465 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 GNGT2O14610 69 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 XPNPEP2O43895 674 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 TSPAN12O95859 305 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 CST1P01037 141 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 CDH3P22223 829 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 KCNAB2Q13303 367 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 NR6A1Q15406 480 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 GTDC1Q4AE62 458 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PDCD4Q53EL6 469 aaKnown RBP13.84□□□□□ -0.19
USH1C-201ENST00000005226 C6orf141Q5SZD1 244 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 GDF6Q6KF10 455 aaPredicted RBP13.84□□□□□ -0.19
USH1C-201ENST00000005226 TAF2Q6P1X5 1199 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 CYP20A1Q6UW02 462 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 GPSM1Q86YR5 675 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 RNF168Q8IYW5 571 aaPredicted RBP13.84□□□□□ -0.19
USH1C-201ENST00000005226 PHACTR4Q8IZ21 702 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 EFHBQ8N7U6 833 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 ATAD1Q8NBU5 361 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 OR56A4Q8NGH8 313 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 TRUB1Q8WWH5 349 aaKnown RBP13.84□□□□□ -0.19
USH1C-201ENST00000005226 SDCCAG3Q96C92 435 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PTPN18Q99952 460 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PAK1IP1Q9NWT1 392 aaPredicted RBP13.84□□□□□ -0.19
USH1C-201ENST00000005226 TMEM9Q9P0T7 183 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 ADGRE2Q9UHX3 823 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PCDHGA4Q9Y5G9 962 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 TRPV2Q9Y5S1 764 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 SLC12A8A0AV02 714 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 SOBPA7XYQ1 873 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 GSTA4O15217 222 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PARNO95453 639 aaKnown RBP13.84□□□□□ -0.19
USH1C-201ENST00000005226 CYP11A1P05108 521 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 FGF1P05230 155 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 RAP2AP10114 183 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 JUNBP17275 347 aaPredicted RBP13.84□□□□□ -0.19
USH1C-201ENST00000005226 ITGB6P18564 788 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PBX3P40426 434 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 KPNA1P52294 538 aaPredicted RBP13.84□□□□□ -0.19
USH1C-201ENST00000005226 ARPP19P56211 112 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 FPGSQ05932 587 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 ABRAXAS2Q15018 415 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 FAM98BQ52LJ0 330 aaKnown RBP13.84□□□□□ -0.19
USH1C-201ENST00000005226 SGO1Q5FBB7 561 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 TERB1Q8NA31 727 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 FKBP10Q96AY3 582 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 MUC13Q9H3R2 512 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 FKBPLQ9UIM3 349 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 FBXO10Q9UK96 956 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 NEUROG3Q9Y4Z2 214 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 TRIM43BA6NCK2 446 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 FFAR3O14843 346 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 GPR42O15529 346 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 HS6ST1O60243 411 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PRKD3O94806 890 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PURAQ00577 322 aaKnown RBP13.84□□□□□ -0.19
USH1C-201ENST00000005226 IL10RBQ08334 325 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 TYSND1Q2T9J0 566 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 AP5B1Q2VPB7 878 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 SLC16A12Q6ZSM3 486 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 GLT6D1Q7Z4J2 308 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 CNIH3Q8TBE1 160 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 TSPEARQ8WU66 669 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 HPS4Q9NQG7 708 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 MAGEL2Q9UJ55 1249 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PADI3Q9ULW8 664 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PDE10AQ9Y233 779 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 PCDHGC4Q9Y5F7 938 aa13.84□□□□□ -0.19
USH1C-201ENST00000005226 TMEM247A6NEH6 219 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 M0QZQ0 153 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 MITFO75030 526 aaPredicted RBP13.83□□□□□ -0.2
USH1C-201ENST00000005226 SERPINF2P08697 491 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 SLC2A4P14672 509 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 GGT1P19440 569 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 HLA-DPA1P20036 260 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 OGNP20774 298 aaKnown RBP13.83□□□□□ -0.2
USH1C-201ENST00000005226 CPT1AP50416 773 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 CRY1Q16526 586 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 ZRANB3Q5FWF4 1079 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 C10orf120Q5SQS8 335 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 MON1AQ86VX9 555 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 CLHC1Q8NHS4 586 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 RAB2BQ8WUD1 216 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 ALOXE3Q9BYJ1 711 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 POPDC3Q9HBV1 291 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 C8orf4Q9NR00 106 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 FARSBQ9NSD9 589 aaKnown RBP13.83□□□□□ -0.2
USH1C-201ENST00000005226 ZIM2Q9NZV7 527 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.83□□□□□ -0.2
USH1C-201ENST00000005226 DAPK2Q9UIK4 370 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 GNPTGQ9UJJ9 305 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 BAG5Q9UL15 447 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 SLC30A1Q9Y6M5 507 aa13.83□□□□□ -0.2
USH1C-201ENST00000005226 TYW5A2RUC4 315 aaKnown RBP13.83□□□□□ -0.2
USH1C-201ENST00000005226 IQCA1LA6NCM1 817 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms