RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Letm2Q7TNU7 480 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 AftphQ80WT5 931 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Ttc24Q8BYG0 334 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Csnk1g3Q8C4X2 424 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Wdr37Q8CBE3 496 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Mcoln3Q8R4F0 553 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Socs7Q8VHQ2 579 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Zfp65Q91W94 390 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Rnf167Q91XF4 347 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Pcdha8Q91Y12 946 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Anks3Q9CZK6 655 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Rfc5Q9D0F6 339 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 S100pbpQ9D5K4 396 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 MrrfQ9D6S7 262 aaKnown RBP7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Gid8Q9D7M1 228 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 NckipsdQ9ESJ4 714 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 Cldn19Q9ET38 224 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 SqorQ9R112 450 aa7.09□□□□□ -1.27
Clrn1-202ENSMUST00000055636 6720489N17RikA0A1Y7VJW0 127 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Pbx2O35984 430 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 CrymO54983 313 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 P01669 111 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Gli1P47806 1111 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Lhx3P50481 400 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Aff3P51827 1254 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Cdkn2bP55271 130 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Aqp1Q02013 269 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Jmjd8Q3TA59 316 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Brms1lQ3U1T3 323 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Ccdc61Q3UJV1 511 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Slc22a15Q504N2 544 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Glp2rQ5IXF8 512 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Phf12Q5SPL2 1003 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Fstl1Q62356 306 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Itga2Q62469 1178 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Znf280cQ6P3Y5 742 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Fam83eQ80XS7 481 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Zfp418Q8BFS8 652 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 MylipQ8BM54 445 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 MaelQ8BVN9 434 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Cars2Q8BYM8 551 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Parp12Q8BZ20 711 aaKnown RBP7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Tbl3Q8C4J7 801 aaKnown RBP7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Vps50Q8CI71 964 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Slc45a3Q8K0H7 553 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Pcdhb8Q91XZ2 779 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Cwh43Q91YL7 699 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Frmd4bQ920B0 1035 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Adam33Q923W9 797 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 AdprmQ99KS6 340 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Trim33Q99PP7 1142 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Pmf1Q9CPV5 202 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Tmem9Q9CR23 183 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Tmed10Q9D1D4 219 aaKnown RBP7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Smim23Q9DAL0 136 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Cdh17Q9R100 827 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Gsk3bQ9WV60 420 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Slc22a4Q9Z306 553 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Osbpl10S4R1M9 766 aa7.09□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Igkv17-121A0A0G2JFA8 117 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Rhbdl2A2AGA4 302 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Man1b1A2AJ15 658 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Ttll3A4Q9E5 927 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Zfp558E9Q1J0 407 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Olfr414E9Q5P8 317 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Gm11239E9Q5Z9 360 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Gm11237F2Z3W5 360 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Gm11238F2Z478 360 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Trim15G3UY57 292 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Vmn2r67K7N6T2 851 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 NapsaO09043 419 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Tpst1O70281 370 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Mtnd4P03911 459 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 JunbP09450 344 aaKnown RBP7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 SpnP15702 395 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Hspa1bP17879 642 aaKnown RBP7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Lsp1P19973 330 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Wnt6P22727 364 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Cdc25bP30306 576 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Rpl36P47964 105 aaKnown RBP7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Ppp3ccP48455 513 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Slc26a1P58735 704 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Stx1bP61264 288 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Smpdl3aP70158 445 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Pip5k1bP70181 539 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Kcnab3P97382 249 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Myadml2Q08AU7 307 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 IqcmQ149I8 489 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Zyg11bQ3UFS0 744 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Lrrc58Q3UGP9 366 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 BtrcQ3ULA2 605 aaKnown RBP7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Gm428Q3UTE2 360 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Gm11487Q5RIS0 354 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Nfe2l2Q60795 597 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Six3Q62233 333 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Adamts16Q69Z28 1222 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Ppp1r26Q6A025 1163 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Gpr17Q6NS65 339 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Olfr698Q7TRN4 311 aa7.08□□□□□ -1.28
Clrn1-202ENSMUST00000055636 Klhl42Q8BFQ9 493 aa7.08□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms