RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 CATSPEREQ5SY80 951 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 ERMP1Q7Z2K6 904 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 LRRTM3Q86VH5 581 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 CCDC185Q8N715 623 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 DCBLD1Q8N8Z6 715 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 CNIH3Q8TBE1 160 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 SMAD5Q99717 465 aaKnown RBP11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 BDH2Q9BUT1 245 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 HPS4Q9NQG7 708 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 C8orf4Q9NR00 106 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 VPS4AQ9UN37 437 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 RWDD3Q9Y3V2 267 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 PCDHB3Q9Y5E6 796 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 SMIM30A4D0T7 59 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 ARVCFO00192 962 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 AP3D1O14617 1153 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 ENDOD1O94919 500 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 HTR1BP28222 390 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 CD40LGP29965 261 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 GATMP50440 423 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 HK2P52789 917 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 MAPK12P53778 367 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 P2RX3P56373 397 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 DMC1Q14565 340 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 ZNF773Q6PK81 442 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 SLC26A9Q7LBE3 791 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 ASB12Q8WXK4 309 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 MFSD3Q96ES6 412 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 DHRS4Q9BTZ2 278 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 SNRNP25Q9BV90 132 aaKnown RBP11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 FAM172BPA6NC97 362 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 CHADO15335 359 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 JRKO75564 520 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 CHRNB3Q05901 458 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 CTBP1Q13363 440 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 SYPL2Q5VXT5 272 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 FSTL4Q6MZW2 842 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 PPP4R4Q6NUP7 873 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 DHRS4L2Q6PKH6 230 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 KLHL17Q6TDP4 642 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 PYROXD2Q8N2H3 581 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 ASIC4Q96FT7 647 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 CHCHD6Q9BRQ6 235 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 TSEN34Q9BSV6 310 aaKnown RBP11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 MED10Q9BTT4 135 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 ATXN3LQ9H3M9 355 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 ELOVL6Q9H5J4 265 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 ZBTB26Q9HCK0 441 aa11.73□□□□□ -0.53
RBFOX1-224ENST00000641259 EVPLLA8MZ36 301 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 HHLA1C9JL84 531 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 MBL2P11226 248 aaPredicted RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 PSMB4P28070 264 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 SDC4P31431 198 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 BMPR1AP36894 532 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 NRG1Q02297 640 aaPredicted RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 MRPL28Q13084 256 aaKnown RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 PDK2Q15119 407 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 ATAD3CQ5T2N8 411 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 GLYATQ6IB77 296 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 AHSA2Q719I0 299 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 DCP2Q8IU60 420 aaKnown RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 FAM126BQ8IXS8 530 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 ATP6V0D2Q8N8Y2 350 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 MED30Q96HR3 178 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 NSMCE2Q96MF7 247 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 THUMPD3Q9BV44 507 aaKnown RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 LRRC40Q9H9A6 602 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 SLC35C2Q9NQQ7 365 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 FKBP14Q9NWM8 211 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 LIMD1Q9UGP4 676 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 NUFIP1Q9UHK0 495 aaKnown RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 MID2Q9UJV3 735 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 PCDHA11Q9Y5I1 949 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 TRPC5OSA6NMA1 111 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 TRIM24O15164 1050 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 TMBIM6P55061 237 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 ALDH6A1Q02252 535 aaKnown RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 BHLHA9Q7RTU4 235 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 TIGD4Q8IY51 512 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 ST8SIA2Q92186 375 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 CSF3RQ99062 836 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 HBEGFQ99075 208 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 PHOX2BQ99453 314 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 PKMYT1Q99640 499 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 SLC25A23Q9BV35 468 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 CCSER2Q9H7U1 834 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 SCN3BQ9NY72 215 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 NDUFAF1Q9Y375 327 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 CCDC182A6NF36 153 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 SSX4O60224 188 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 GNRH1P01148 92 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 FCER2P06734 321 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 RPL9P32969 192 aaKnown RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 SHMT2P34897 504 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 TUSC3Q13454 348 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 CYP27C1Q4G0S4 372 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 STEAP3Q658P3 488 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms