RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 GOLGB1Q14789 3259 aaKnown RBP14.64□□□□□ -0.07
CACNA1A-220ENST00000635988 PTGES3LE9PB15 166 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 SLC16A6O15403 523 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 MSI1O43347 362 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 KLK8O60259 260 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 ECI2O75521 394 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 RPP40O75818 363 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 PIGAP37287 484 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 IFITM3Q01628 133 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 HIST2H2ACQ16777 129 aaPredicted RBP14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 PAGE2BQ5JRK9 111 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 LACC1Q8IV20 430 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 FAM126BQ8IXS8 530 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 UMODL1-AS1Q8N2C9 162 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 OR2T12Q8NG77 320 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 OR5K1Q8NHB7 308 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 FAR1Q8WVX9 515 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 CAMKK2Q96RR4 588 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 HERC2P3Q9BVR0 1158 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 TRIT1Q9H3H1 467 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 SMOC2Q9H3U7 446 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 SPC25Q9HBM1 224 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 CATSPERZQ9NTU4 200 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 DNMT3BQ9UBC3 853 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 RIMKLBQ9ULI2 386 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 AP3M1Q9Y2T2 418 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 LOC285095A0A1B0GVY8 99 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 ISPDA4D126 451 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 MYO1DO94832 1006 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 NDST3O95803 873 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 MMP2P08253 660 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 AGXTP21549 392 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 SERPINB1P30740 379 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 MTPNP58546 118 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 DSC2Q02487 901 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 EMX1Q04741 257 aaPredicted RBP14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 PIGFQ07326 219 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 CDC20Q12834 499 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 RBBP7Q16576 425 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 GPRIN3Q6ZVF9 776 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 RBM23Q86U06 439 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 SETD9Q8NE22 299 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 GLMNQ92990 594 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 MYLPFQ96A32 169 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 SLC47A1Q96FL8 570 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 SP140LQ9H930 580 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 AGO3Q9H9G7 860 aaKnown RBP14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 UXTQ9UBK9 157 aaPredicted RBP14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 PCTPQ9UKL6 214 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 ATP11BQ9Y2G3 1177 aa14.63□□□□□ -0.07
CACNA1A-220ENST00000635988 TOR1BO14657 336 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 RHOBTB1O94844 696 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 BMP4P12644 408 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 MSH3P20585 1137 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 STC1P52823 247 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 MAXP61244 160 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 INAVAQ3KP66 663 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ZNF792Q3KQV3 632 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ZNF362Q5T0B9 420 aaPredicted RBP14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 LAIR2Q6ISS4 152 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 SPESP1Q6UW49 350 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 P2RY8Q86VZ1 359 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 NKAPQ8N5F7 415 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ATP6V0D2Q8N8Y2 350 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 OR2T11Q8NH01 316 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 OR4L1Q8NH43 312 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 FBLIM1Q8WUP2 373 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 TADA1Q96BN2 335 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ZNF583Q96ND8 569 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 C17orf80Q9BSJ5 609 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ASPSCR1Q9BZE9 553 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ACTR8Q9H981 624 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 MPP6Q9NZW5 540 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 TPRKBQ9Y3C4 175 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 KCTD3Q9Y597 815 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 TIMM13Q9Y5L4 95 aaPredicted RBP14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 MIA3Q5JRA6 1907 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 HS6ST1O60243 411 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 NOBOXO60393 691 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 SCELO95171 688 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ATXN1LP0C7T5 689 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 HLA-DPA1P20036 260 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 PPP5CP53041 499 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 SLC10A7Q0GE19 358 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 TYSND1Q2T9J0 566 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ADPRMQ3LIE5 342 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ARTNQ5T4W7 220 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ARMC8Q8IUR7 673 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 C17orf50Q8WW18 174 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 TRIB2Q92519 343 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 FIG4Q92562 907 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 SH3GL1Q99961 368 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 SP110Q9HB58 689 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 THG1LQ9NWX6 298 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 LIMD1Q9UGP4 676 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 ADGRE2Q9UHX3 823 aa14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 INTS6Q9UL03 887 aaKnown RBP14.62□□□□□ -0.07
CACNA1A-220ENST00000635988 NYNRINQ9P2P1 1898 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms