RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PAG1Q9NWQ8 432 aa2.55□□□□□ -2
SMARCB1-208ENST00000634926 MCM9Q9NXL9 1143 aa2.55□□□□□ -2
SMARCB1-208ENST00000634926 NYAP2Q9P242 653 aa2.55□□□□□ -2
SMARCB1-208ENST00000634926 THEGQ9P2T0 379 aa2.55□□□□□ -2
SMARCB1-208ENST00000634926 NFKBIL1Q9UBC1 381 aaPredicted RBP2.55□□□□□ -2
SMARCB1-208ENST00000634926 ERRFI1Q9UJM3 462 aaPredicted RBP2.55□□□□□ -2
SMARCB1-208ENST00000634926 HAO1Q9UJM8 370 aa2.55□□□□□ -2
SMARCB1-208ENST00000634926 RPS6KA6Q9UK32 745 aa2.55□□□□□ -2
SMARCB1-208ENST00000634926 FBXO4Q9UKT5 387 aa2.55□□□□□ -2
SMARCB1-208ENST00000634926 PCDHGB5Q9Y5G0 923 aa2.55□□□□□ -2
SMARCB1-208ENST00000634926 TRIP12Q14669 1992 aaPredicted RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 MYH6P13533 1939 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 LOXHD1Q8IVV2 1947 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ZMYM2Q9UBW7 1377 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 CHD6Q8TD26 2715 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ZMYM6O95789 1325 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 EPG5Q9HCE0 2579 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 A0A0U1RQG5 324 aaPredicted RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 TARSL2A2RTX5 802 aaKnown RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 CBY3A6NI87 242 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 USP17L23D6RBM5 183 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 SCAMP1O15126 338 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 MSI1O43347 362 aaKnown RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 LIASO43766 372 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 KIF1CO43896 1103 aaKnown RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 HNRNPCL1O60812 293 aaKnown RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 DKC1O60832 514 aaKnown RBP eCLIP2.54□□□□□ -2
SMARCB1-208ENST00000634926 SEC31AO94979 1220 aaKnown RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 OR2C1O95371 312 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 PLAUP00749 431 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 IL1AP01583 271 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 IGKV3-20P01619 116 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 LCKP06239 509 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 HOXB5P09067 269 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 LINC00271P0C7V0 271 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 T-ENOLP0DO92 83 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ST6GAL1P15907 406 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 PTPN2P17706 415 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 TFEBP19484 476 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 HOXC8P31273 242 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 GNAQP50148 359 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 CYP2J2P51589 502 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ARSFP54793 590 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 SNX16P57768 344 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ZXDBP98169 803 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 CNTN2Q02246 1040 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 GHRHRQ02643 423 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 MTA1Q13330 715 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 PPIGQ13427 754 aaKnown RBP eCLIP2.54□□□□□ -23e-8■□□□□ 8.3
SMARCB1-208ENST00000634926 OLIG2Q13516 323 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 GALNT3Q14435 633 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 IRF3Q14653 427 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 GPNMBQ14956 572 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 RNPS1Q15287 305 aaKnown RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 HIST2H2ACQ16777 129 aaPredicted RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 ME3Q16798 604 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 RAB41Q5JT25 222 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 SNRNP48Q6IEG0 339 aaKnown RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 SLC30A6Q6NXT4 461 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 MOB3CQ70IA8 216 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ARMCX2Q7L311 632 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 GSTA5Q7RTV2 222 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 TLK2Q86UE8 772 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 GPAT4Q86UL3 456 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 WDR5BQ86VZ2 330 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 TICAM1Q8IUC6 712 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ITPRIPQ8IWB1 547 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 C17orf53Q8N3J3 647 aaPredicted RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 TMEM217Q8N7C4 229 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 NKAIN3Q8N8D7 197 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ARL14EPQ8N8R7 260 aaPredicted RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 KBTBD3Q8NAB2 608 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 GDPD5Q8WTR4 605 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 FAR1Q8WVX9 515 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 PSPC1Q8WXF1 523 aaKnown RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 JAKMIP2Q96AA8 810 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 CCDC34Q96HJ3 373 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 PGAM5Q96HS1 289 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 WDFY2Q96P53 400 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 YME1L1Q96TA2 773 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 TM2D2Q9BX73 214 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 AP1M1Q9BXS5 423 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 MAK16Q9BXY0 300 aaKnown RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 SEZ6LQ9BYH1 1024 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 TXLNGYQ9BZA5 131 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ALDH8A1Q9H2A2 487 aaPredicted RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 HIPK3Q9H422 1215 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 PLEKHA4Q9H4M7 779 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 CXorf56Q9H5V9 222 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 POLR1BQ9H9Y6 1135 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 MLXIPLQ9NP71 852 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 ASAH2Q9NR71 780 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 CYP39A1Q9NYL5 469 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 SUCLA2Q9P2R7 463 aaPredicted RBP2.54□□□□□ -2
SMARCB1-208ENST00000634926 MKLN1Q9UL63 735 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 Q9Y3F1 56 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 MTCH2Q9Y6C9 303 aa2.54□□□□□ -2
SMARCB1-208ENST00000634926 DDX49Q9Y6V7 483 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms