RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	WNT3A	P56704	352 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	FOXK1	P85037	733 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	GTF2H3	Q13889	308 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	NFE2L1	Q14494	772 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	CHRNA6	Q15825	494 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	LACTB2	Q53H82	288 aa	Predicted RBP	11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	AGAP9	Q5VTM2	703 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	MICALCL	Q6ZW33	695 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	ZC3H18	Q86VM9	953 aa	Known RBP	11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	VSIG1	Q86XK7	387 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	RHOT1	Q8IXI2	618 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	ZNF567	Q8N184	647 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	BEND7	Q8N7W2	519 aa	Predicted RBP	11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	IPMK	Q8NFU5	416 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	BLOC1S5	Q8TDH9	187 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	CT55	Q8WUE5	264 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	KLHL6	Q8WZ60	621 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	IL26	Q9NPH9	171 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	FAM8A1	Q9UBU6	413 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	ANAPC2	Q9UJX6	822 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	TFR2	Q9UP52	801 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	PLAA	Q9Y263	795 aa		11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	CFAP20	Q9Y6A4	193 aa	Known RBP	11.86	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	LOC285095	A0A1B0GVY8	99 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	CDC14C	A4D256	554 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	TOX3	O15405	576 aa	Predicted RBP	11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	SPOP	O43791	374 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	DNAJB5	O75953	348 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	EBLN1	P0CF75	366 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	FGF5	P12034	268 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	FOLR1	P15328	257 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	ZFX	P17010	805 aa	Predicted RBP	11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	HMGCL	P35914	325 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	SPAM1	P38567	509 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	ARHGAP25	P42331	645 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	RPS18	P62269	152 aa	Known RBP	11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	MC1R	Q01726	317 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	OLIG2	Q13516	323 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	DNASE1L3	Q13609	305 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	TAZ	Q16635	292 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	ODF2	Q5BJF6	829 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	GPRC6A	Q5T6X5	926 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	WASH2P	Q6VEQ5	465 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	SPOCD1	Q6ZMY3	1216 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	DET1	Q7L5Y6	550 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	GLT6D1	Q7Z4J2	308 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	RHOT2	Q8IXI1	618 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	TFB1M	Q8WVM0	346 aa	Known RBP	11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	MAP3K3	Q99759	626 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	GORASP1	Q9BQQ3	440 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	C10orf88	Q9H8K7	445 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	WASH6P	Q9NQA3	447 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	DDX56	Q9NY93	547 aa	Known RBP	11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	IL17C	Q9P0M4	197 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	FAM153A	Q9UHL3	310 aa		11.85	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	GLYATL1P3	A0A0U1RQE8	302 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	GOLGA6L3	A6NEY3	463 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	DDX3Y	O15523	660 aa	Known RBP	11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	MTSS1	O43312	755 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	POP7	O75817	140 aa	Known RBP	11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	PDGFA	P04085	211 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	NELFE	P18615	380 aa	Known RBP	11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	FECH	P22830	423 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	HAL	P42357	657 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	ARCN1	P48444	511 aa	Known RBP	11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	DMPK	Q09013	629 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	TUBB3	Q13509	450 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	SEPT6	Q14141	434 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	TRIM14	Q14142	442 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	IL11RA	Q14626	422 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	PLCL1	Q15111	1095 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	SLC1A5	Q15758	541 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	RPE65	Q16518	533 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	PPP2R5E	Q16537	467 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	CRTC2	Q53ET0	693 aa	Predicted RBP	11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	LRRC38	Q5VT99	294 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	CCDC70	Q6NSX1	233 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	PWWP2B	Q6NUJ5	590 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	FBXO38	Q6PIJ6	1188 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	TMEM220	Q6QAJ8	160 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	AMZ2	Q86W34	360 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	PPP1R3B	Q86XI6	285 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	VSTM4	Q8IW00	320 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	DDHD1	Q8NEL9	900 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	CCDC42	Q96M95	316 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	PPM1M	Q96MI6	270 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	TTC25	Q96NG3	672 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	TRIM55	Q9BYV6	548 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	LHX9	Q9NQ69	397 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	IMP3	Q9NV31	184 aa	Known RBP	11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	ANKMY1	Q9P2S6	941 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	EPHA6	Q9UF33	1036 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	POLH	Q9Y253	713 aa		11.84	□□□□□ -0.51
SOX2-OT-256	ENST00000630482	KCTD3	Q9Y597	815 aa		11.84	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms