RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 WDR48Q8TAF3 677 aa17.96■□□□□ 0.47
LITAF-220ENST00000620789 TRIM56Q9BRZ2 755 aaKnown RBP17.96■□□□□ 0.47
LITAF-220ENST00000620789 ERP44Q9BS26 406 aa17.96■□□□□ 0.47
LITAF-220ENST00000620789 WASH6PQ9NQA3 447 aa17.96■□□□□ 0.47
LITAF-220ENST00000620789 MARCH4Q9P2E8 410 aaPredicted RBP17.96■□□□□ 0.47
LITAF-220ENST00000620789 KLK13Q9UKR3 277 aa17.96■□□□□ 0.47
LITAF-220ENST00000620789 NEUROG3Q9Y4Z2 214 aa17.96■□□□□ 0.47
LITAF-220ENST00000620789 MRFAP1Q9Y605 127 aa17.96■□□□□ 0.47
LITAF-220ENST00000620789 MAD1L1Q9Y6D9 718 aa17.96■□□□□ 0.47
LITAF-220ENST00000620789 RPS6KL1Q9Y6S9 549 aa17.96■□□□□ 0.47
LITAF-220ENST00000620789 PTPRBP23467 1997 aa17.96■□□□□ 0.47
LITAF-220ENST00000620789 ASXL3Q9C0F0 2248 aa17.96■□□□□ 0.47
LITAF-220ENST00000620789 FAM221BA6H8Z2 402 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 RHPN2P1A8MT19 583 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 QSOX1O00391 747 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 NDC80O14777 642 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 PPM1DO15297 605 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 BRAFP15056 766 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 RPL10P27635 214 aaKnown RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 RPL21P46778 160 aaKnown RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 ARCN1P48444 511 aaKnown RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 TTPAP49638 278 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 DRG2P55039 364 aaKnown RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 DHX9Q08211 1270 aaKnown RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 TUBB2AQ13885 445 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 NFE2L1Q14494 772 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 NR1D2Q14995 579 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 DNAJC21Q5F1R6 531 aaKnown RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 METRNLQ641Q3 311 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 FAM83HQ6ZRV2 1179 aaPredicted RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 SLC9B2Q86UD5 537 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 KIF18AQ8NI77 898 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 HM13Q8TCT9 377 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 ZNF669Q96BR6 464 aaPredicted RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 STAMBPL1Q96FJ0 436 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 FCRL3Q96P31 734 aaPredicted RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 TUBB2BQ9BVA1 445 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 STN1Q9H668 368 aaKnown RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 VPS37BQ9H9H4 285 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 SARS2Q9NP81 518 aaKnown RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 SCHIP1Q9P0W5 487 aaPredicted RBP17.95■□□□□ 0.46
LITAF-220ENST00000620789 SNX24Q9Y343 169 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 PRSS21Q9Y6M0 314 aa17.95■□□□□ 0.46
LITAF-220ENST00000620789 RP1P56715 2156 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 ZCWPW2A0A1B0GU75 182 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 C17orf113A0A1B0GUU1 675 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 TP73O15350 636 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 OR1I1O60431 355 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 USP1O94782 785 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 HHEXQ03014 270 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 MSS51Q4VC12 460 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.94■□□□□ 0.46
LITAF-220ENST00000620789 CDCP2Q5VXM1 449 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 MRNIPQ6NTE8 343 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 XKR5Q6UX68 686 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 SPRED1Q7Z699 444 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 LDB1Q86U70 411 aaPredicted RBP17.94■□□□□ 0.46
LITAF-220ENST00000620789 CCNJLQ8IV13 435 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 PDIK1LQ8N165 341 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 CACTIN-AS1Q8N1I8 211 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 Q8N9G6 341 aaPredicted RBP17.94■□□□□ 0.46
LITAF-220ENST00000620789 AVL9Q8NBF6 648 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 BBOF1Q8ND07 529 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 CCM2Q9BSQ5 444 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 FAM8A1Q9UBU6 413 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 CLCA2Q9UQC9 943 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 WDR37Q9Y2I8 494 aa17.94■□□□□ 0.46
LITAF-220ENST00000620789 FAM149AA5PLN7 773 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 GOLGA8KD6RF30 607 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 GOLGA8TH3BQL2 631 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 NTN3O00634 580 aaPredicted RBP17.93■□□□□ 0.46
LITAF-220ENST00000620789 CASC3O15234 703 aaKnown RBP17.93■□□□□ 0.46
LITAF-220ENST00000620789 BANF1O75531 89 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 TCEA3O75764 348 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 MT-CO3P00414 261 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 RPLP0P05388 317 aaKnown RBP17.93■□□□□ 0.46
LITAF-220ENST00000620789 POLBP06746 335 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 GSTM1P09488 218 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 OR56A5P0C7T3 313 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 JUPP14923 745 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 PGAM1P18669 254 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 XRCC1P18887 633 aaPredicted RBP17.93■□□□□ 0.46
LITAF-220ENST00000620789 HALP42357 657 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 GPR3P46089 330 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 UBE2IP63279 158 aaKnown RBP17.93■□□□□ 0.46
LITAF-220ENST00000620789 CCL7P80098 99 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 GSTM4Q03013 218 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 HIF1AQ16665 826 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 BBS9Q3SYG4 887 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 DUPD1Q68J44 220 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 OTUD6BQ8N6M0 293 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 DCBLD1Q8N8Z6 715 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 GPR150Q8NGU9 434 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 PWWP2AQ96N64 755 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 EBNA1BP2Q99848 306 aaKnown RBP17.93■□□□□ 0.46
LITAF-220ENST00000620789 DPH5Q9H2P9 285 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 LRRN3Q9H3W5 708 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 SYNDIG1Q9H7V2 258 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 WHRNQ9P202 907 aa17.93■□□□□ 0.46
LITAF-220ENST00000620789 CPNE7Q9UBL6 633 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms