RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 CCNJLQ8IV13 435 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 LMNTD2Q8IXW0 634 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 PDIK1LQ8N165 341 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 KIF18AQ8NI77 898 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 HM13Q8TCT9 377 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 SLC37A2Q8TED4 501 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 LRRC39Q96DD0 335 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 MFSD3Q96ES6 412 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 SIGLEC10Q96LC7 697 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 TCF12Q99081 682 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 TRIM51Q9BSJ1 452 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 SCNM1Q9BWG6 230 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.34■□□□□ 0.05
RPP40-207ENST00000618533 CLCA2Q9UQC9 943 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 DNAJC16Q9Y2G8 782 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 MSRB2Q9Y3D2 182 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 RNF215Q9Y6U7 377 aa15.34■□□□□ 0.05
RPP40-207ENST00000618533 OR51F1A6NGY5 319 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 PDZK1P1A8MUH7 402 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 SNX2O60749 519 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 TTC4O95801 387 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 FTH1P02794 183 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 POLBP06746 335 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 OR56A5P0C7T3 313 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 XRCC1P18887 633 aaPredicted RBP15.33■□□□□ 0.04
RPP40-207ENST00000618533 MAZP56270 477 aaKnown RBP15.33■□□□□ 0.04
RPP40-207ENST00000618533 HHEXQ03014 270 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 C2orf54Q08AI8 447 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 KCTD19Q17RG1 926 aaPredicted RBP15.33■□□□□ 0.04
RPP40-207ENST00000618533 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.33■□□□□ 0.04
RPP40-207ENST00000618533 RNF187Q5TA31 235 aaPredicted RBP15.33■□□□□ 0.04
RPP40-207ENST00000618533 METRNLQ641Q3 311 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 ZNF449Q6P9G9 518 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 DET1Q7L5Y6 550 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 SPRED1Q7Z699 444 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 SDCCAG8Q86SQ7 713 aaPredicted RBP15.33■□□□□ 0.04
RPP40-207ENST00000618533 LRRC6Q86X45 466 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 RBM12BQ8IXT5 1001 aaKnown RBP15.33■□□□□ 0.04
RPP40-207ENST00000618533 DCBLD1Q8N8Z6 715 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 MNS1Q8NEH6 495 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 GPR150Q8NGU9 434 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 GABPB2Q8TAK5 448 aaPredicted RBP15.33■□□□□ 0.04
RPP40-207ENST00000618533 ZNF592Q92610 1267 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 STAMBPL1Q96FJ0 436 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 DEPDC7Q96QD5 511 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 ERP44Q9BS26 406 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 CCM2Q9BSQ5 444 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 TSSK1BQ9BXA7 367 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 RAB17Q9H0T7 212 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 UCK1Q9HA47 277 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 PRDM8Q9NQV8 689 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 WHRNQ9P202 907 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 VPS9D1Q9Y2B5 631 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 RPS6KL1Q9Y6S9 549 aa15.33■□□□□ 0.04
RPP40-207ENST00000618533 COL27A1Q8IZC6 1860 aaPredicted RBP15.32■□□□□ 0.04
RPP40-207ENST00000618533 NTN3O00634 580 aaPredicted RBP15.32■□□□□ 0.04
RPP40-207ENST00000618533 VAPBO95292 243 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 JUPP14923 745 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 PGAM1P18669 254 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 OGNP20774 298 aaKnown RBP15.32■□□□□ 0.04
RPP40-207ENST00000618533 ITGA8P53708 1063 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 EPHA4P54764 986 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 GPLD1P80108 840 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 PLOD1Q02809 727 aaPredicted RBP15.32■□□□□ 0.04
RPP40-207ENST00000618533 CALCOCO2Q13137 446 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 RPA4Q13156 261 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 CBLBQ13191 982 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 SPIDRQ14159 915 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 ANKRD20A4Q4UJ75 823 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 CCNI2Q6ZMN8 369 aaPredicted RBP15.32■□□□□ 0.04
RPP40-207ENST00000618533 RBM44Q6ZP01 1051 aaKnown RBP15.32■□□□□ 0.04
RPP40-207ENST00000618533 CALML6Q8TD86 181 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 PATE1Q8WXA2 126 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 ZNF669Q96BR6 464 aaPredicted RBP15.32■□□□□ 0.04
RPP40-207ENST00000618533 DPYSL5Q9BPU6 564 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 LRRN3Q9H3W5 708 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 EPB41L1Q9H4G0 881 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 POT1Q9NUX5 634 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 CPNE7Q9UBL6 633 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 UTP11Q9Y3A2 253 aaKnown RBP15.32■□□□□ 0.04
RPP40-207ENST00000618533 MRFAP1Q9Y605 127 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 MAD1L1Q9Y6D9 718 aa15.32■□□□□ 0.04
RPP40-207ENST00000618533 TMX2-CTNND1H3BSU7 103 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 PRMT5O14744 637 aaPredicted RBP15.31■□□□□ 0.04
RPP40-207ENST00000618533 LIN7AO14910 233 aaPredicted RBP15.31■□□□□ 0.04
RPP40-207ENST00000618533 PPM1DO15297 605 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 RAD51CO43502 376 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 EML2O95834 649 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 MT-CO3P00414 261 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 PRSS56P0CW18 603 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 RPS3P23396 243 aaKnown RBP eCLIP15.31■□□□□ 0.04
RPP40-207ENST00000618533 ARNTP27540 789 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 RPL21P46778 160 aaKnown RBP15.31■□□□□ 0.04
RPP40-207ENST00000618533 ARCN1P48444 511 aaKnown RBP15.31■□□□□ 0.04
RPP40-207ENST00000618533 ARL4CP56559 192 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 UBE2IP63279 158 aaKnown RBP15.31■□□□□ 0.04
RPP40-207ENST00000618533 SQSTM1Q13501 440 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 NFE2L1Q14494 772 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 HIF1AQ16665 826 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 TYSND1Q2T9J0 566 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms