RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 TYW5A2RUC4 315 aaKnown RBP12.94□□□□□ -0.34
FOXN3-219ENST00000615335 H3BQ06 376 aaPredicted RBP12.94□□□□□ -0.34
FOXN3-219ENST00000615335 TMX2-CTNND1H3BSU7 103 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 DCXO43602 365 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 COX4I1P13073 169 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 PRKCAP17252 672 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 OR1E1P30953 314 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 CLK3P49761 638 aaKnown RBP12.94□□□□□ -0.34
FOXN3-219ENST00000615335 SGSHP51688 502 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 P2RX3P56373 397 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 RAB39AQ14964 217 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 SKIV2LQ15477 1246 aaKnown RBP12.94□□□□□ -0.34
FOXN3-219ENST00000615335 ZNF77Q15935 545 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 TTC33Q6PID6 262 aaPredicted RBP12.94□□□□□ -0.34
FOXN3-219ENST00000615335 EPGNQ6UW88 154 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 TPGS1Q6ZTW0 290 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 TMEM135Q86UB9 458 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 CPNE9Q8IYJ1 553 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 PHTF2Q8N3S3 785 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 ZNF781Q8N8C0 355 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 SMARCD2Q92925 531 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 TRIM63Q969Q1 353 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 ERLEC1Q96DZ1 483 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 ASB16Q96NS5 453 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 AGAP2Q99490 1192 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 TMEM248Q9NWD8 314 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 MOSPD1Q9UJG1 213 aa12.94□□□□□ -0.34
FOXN3-219ENST00000615335 NUP210Q8TEM1 1887 aaPredicted RBP12.94□□□□□ -0.34
FOXN3-219ENST00000615335 ZSCAN5BA6NJL1 495 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 G3V2L1 256 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 DFFAO00273 331 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 NR4A1P22736 598 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 EPHA3P29320 983 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 PHC1P78364 1004 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 FRG1Q14331 258 aaKnown RBP12.93□□□□□ -0.34
FOXN3-219ENST00000615335 COL19A1Q14993 1142 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 TMEM26Q6ZUK4 368 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 FRMD7Q6ZUT3 714 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 SLC38A6Q8IZM9 456 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 TDRD5Q8NAT2 981 aaKnown RBP12.93□□□□□ -0.34
FOXN3-219ENST00000615335 SMRP1Q8NCR6 262 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 PDCD6IPQ8WUM4 868 aaKnown RBP12.93□□□□□ -0.34
FOXN3-219ENST00000615335 CASS4Q9NQ75 786 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 DOCK8Q8NF50 2099 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 ZCWPW2A0A1B0GU75 182 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 WASH4PA8MWX3 477 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 ASNA1O43681 348 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 TRIM13O60858 407 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 TBL1XO60907 577 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 H2AFYO75367 372 aaKnown RBP12.93□□□□□ -0.34
FOXN3-219ENST00000615335 ZMPSTE24O75844 475 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 CCDC159P0C7I6 412 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 ENPP1P22413 925 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 WEE1P30291 646 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 MTHFRP42898 656 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 CDH4P55283 916 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 IRF9Q00978 393 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 KLF10Q13118 480 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 PEX6Q13608 980 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 C5orf22Q49AR2 442 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 NAPRTQ6XQN6 538 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 PRR23CQ6ZRP0 262 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 DEFB123Q8N688 67 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 EFHD1Q9BUP0 239 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 POMKQ9H5K3 350 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 NANOGQ9H9S0 305 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 CAB39LQ9H9S4 337 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 CPNE5Q9HCH3 593 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 PCDH12Q9NPG4 1184 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 IPO11Q9UI26 975 aaKnown RBP12.93□□□□□ -0.34
FOXN3-219ENST00000615335 RAD54BQ9Y620 910 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 MYOFQ9NZM1 2061 aa12.93□□□□□ -0.34
FOXN3-219ENST00000615335 B8ZZF3 427 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 HAT1O14929 419 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 ZBTB24O43167 697 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 ZBTB14O43829 449 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 CLDN11O75508 207 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 NTRK1P04629 796 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 F7P08709 466 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 ZNF182P17025 639 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 SERPINB1P30740 379 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 ABCG1P45844 678 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 CDC20Q12834 499 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 PMS2P3Q13401 168 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 DLG2Q15700 870 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 CRY1Q16526 586 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 NRF1Q16656 503 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 SLC9B1Q4ZJI4 515 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 BNC2Q6ZN30 1099 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 PLEKHG7Q6ZR37 379 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 CLEC14AQ86T13 490 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 FAM217AQ8IXS0 508 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 CPXM2Q8N436 756 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 AIFM2Q9BRQ8 373 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 LINC00597Q9H2U6 94 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 COQ10BQ9H8M1 238 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 GPN2Q9H9Y4 310 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 NMRAL1Q9HBL8 299 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 CD207Q9UJ71 328 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 WNT6Q9Y6F9 365 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms