RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 CEP290O15078 2479 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 UPK3BL1B0FP48 263 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 UPK3BL2E5RIL1 263 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 ARVCFO00192 962 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 MAGEB3O15480 346 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 TMCC2O75069 709 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 TSPAN19P0C672 248 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 PRSS56P0CW18 603 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 HAPLN1P10915 354 aaPredicted RBP13.69□□□□□ -0.22
MUC1-223ENST00000611571 KRT20P35900 424 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 SRP54P61011 504 aaKnown RBP13.69□□□□□ -0.22
MUC1-223ENST00000611571 GALNT2Q10471 571 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 CBX3Q13185 183 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 TAB1Q15750 504 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 YAF2Q8IY57 180 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 SLC34A3Q8N130 599 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 ENKURQ8TC29 256 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 SLC13A3Q8WWT9 602 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 COX4I2Q96KJ9 171 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 DEPDC7Q96QD5 511 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 GPATCH1Q9BRR8 931 aaKnown RBP13.69□□□□□ -0.22
MUC1-223ENST00000611571 CRISPLD1Q9H336 500 aa13.69□□□□□ -0.22
MUC1-223ENST00000611571 POLR3BQ9NW08 1133 aaPredicted RBP13.69□□□□□ -0.22
MUC1-223ENST00000611571 MARCH4Q9P2E8 410 aaPredicted RBP13.69□□□□□ -0.22
MUC1-223ENST00000611571 PRORSD1PA6NEY8 169 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 SNPHO15079 494 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 TBX1O43435 398 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 TPST2O60704 377 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 ASLP04424 464 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 KCNA10Q16322 511 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 DEF8Q6ZN54 512 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 CYP4Z1Q86W10 505 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 GATAD2AQ86YP4 633 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 ZDHHC21Q8IVQ6 265 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 GTPBP3Q969Y2 492 aaKnown RBP13.68□□□□□ -0.22
MUC1-223ENST00000611571 RPS6KA6Q9UK32 745 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 MAP4K5Q9Y4K4 846 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 TRIM17Q9Y577 477 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 SLC28A1O00337 649 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 SCAMP1O15126 338 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 FFAR2O15552 330 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 JUNP05412 331 aaKnown RBP13.68□□□□□ -0.22
MUC1-223ENST00000611571 DHRS4L1P0CG22 281 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 G6PDP11413 515 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 CDK9P50750 372 aaKnown RBP13.68□□□□□ -0.22
MUC1-223ENST00000611571 ARSDP51689 593 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 YBEYP58557 167 aaPredicted RBP13.68□□□□□ -0.22
MUC1-223ENST00000611571 CLDN10P78369 228 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 MEP1AQ16819 746 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 FAM110CQ1W6H9 321 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 PARP15Q460N3 678 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 TRIQKQ629K1 86 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 TRPV3Q8NET8 790 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 SPPL2BQ8TCT7 592 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 TMEM40Q8WWA1 233 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 BBS4Q96RK4 519 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 CXCL16Q9H2A7 254 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 RHBGQ9H310 441 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 NSUN3Q9H649 340 aaKnown RBP13.68□□□□□ -0.22
MUC1-223ENST00000611571 BRD9Q9H8M2 597 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 MARCH7Q9H992 704 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 C4AP0C0L4 1744 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 C4BP0C0L5 1744 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 SETD1AO15047 1707 aaKnown RBP13.68□□□□□ -0.22
MUC1-223ENST00000611571 GLYATL1P3A0A0U1RQE8 302 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 CXCR6O00574 342 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 OPN1SWP03999 348 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 GABRR2P28476 465 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 IL12AP29459 219 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 PPP2R1BP30154 601 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 TAPT1Q6NXT6 567 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 CYP20A1Q6UW02 462 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 EIF3MQ7L2H7 374 aaKnown RBP13.68□□□□□ -0.22
MUC1-223ENST00000611571 NANOGNBQ7Z5D8 188 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 NPLOC4Q8TAT6 608 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 MYO19Q96H55 970 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 CDC14AQ9UNH5 594 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 SNNO75324 88 aaPredicted RBP13.68□□□□□ -0.22
MUC1-223ENST00000611571 NUDT6P53370 316 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 IST1P53990 364 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 SNRPD1P62314 119 aaKnown RBP13.68□□□□□ -0.22
MUC1-223ENST00000611571 CHIT1Q13231 466 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 FBXL19Q6PCT2 694 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 KLHL17Q6TDP4 642 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 KAT2AQ92830 837 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 NSMCE3Q96MG7 304 aa13.68□□□□□ -0.22
MUC1-223ENST00000611571 TDRD1Q9BXT4 1180 aaKnown RBP13.68□□□□□ -0.22
MUC1-223ENST00000611571 SAP18O00422 153 aaKnown RBP13.67□□□□□ -0.22
MUC1-223ENST00000611571 ACSL4O60488 711 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 CLDN11O75508 207 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 MYL12AP19105 171 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 TNNI3P19429 210 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 ELK4P28324 431 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 HPCAL1P37235 193 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 SREBF2Q12772 1141 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 TMPRSS11BQ86T26 416 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 TMEM135Q86UB9 458 aa13.67□□□□□ -0.22
MUC1-223ENST00000611571 ST13P5Q8NFI4 369 aaPredicted RBP13.67□□□□□ -0.22
MUC1-223ENST00000611571 SHKBP1Q8TBC3 707 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms