RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 OR56A5P0C7T3 313 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 GPR89BP0CG08 455 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 PKMP14618 531 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 NME1P15531 152 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 JUNDP17535 347 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 SAT1P21673 171 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 RPS3P23396 243 aaKnown RBP eCLIP7.56□□□□□ -1.28e-8■■■□□ 16.4
MSH6-211ENST00000606499 GP5P40197 560 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 SLCO1A2P46721 670 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 LIMK2P53671 638 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 CSE1LP55060 971 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 ADARP55265 1226 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 IRX4P78413 519 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 NHLH1Q02575 133 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 PPARDQ03181 441 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 SPEM2Q0P670 501 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 C1orf61Q13536 156 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 BOP1Q14137 746 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 SHBQ15464 509 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 INSCQ1MX18 579 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 HLA-BQ31612 363 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 PRRT3Q5FWE3 981 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 XKR5Q6UX68 686 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 FAM83HQ6ZRV2 1179 aaPredicted RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 PIM3Q86V86 326 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 OXR1Q8N573 874 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 LILRA3Q8N6C8 439 aaPredicted RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 GPATCH11Q8N954 259 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 ZNF548Q8NEK5 533 aaPredicted RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 GIMAP7Q8NHV1 300 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 CCL4L1Q8NHW4 92 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 SCG3Q8WXD2 468 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 VPS39Q96JC1 886 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 ELMO2Q96JJ3 720 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 ZNF514Q96K75 400 aaPredicted RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 ELF4Q99607 663 aaPredicted RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 SLC30A3Q99726 388 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 OLFM1Q99784 485 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 CPNE1Q99829 537 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 AARSD1Q9BTE6 412 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 DHRS4Q9BTZ2 278 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 GTPBP2Q9BX10 602 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 NUSAP1Q9BXS6 441 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 SLC13A1Q9BZW2 595 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 TMEM168Q9H0V1 697 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 CCDC68Q9H2F9 335 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 RHOJQ9H4E5 214 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 RMI1Q9H9A7 625 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 CAB39LQ9H9S4 337 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 SARS2Q9NP81 518 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 PARD6AQ9NPB6 346 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 ARGLU1Q9NWB6 273 aaPredicted RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 UCKL1Q9NWZ5 548 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 GALPQ9UBC7 116 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 GULP1Q9UBP9 304 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 CTNNAL1Q9UBT7 734 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 GMEB2Q9UKD1 530 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 GPR34Q9UPC5 381 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 KCNK6Q9Y257 313 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 PLAAQ9Y263 795 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 DNAJC16Q9Y2G8 782 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 MED16Q9Y2X0 877 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 MTO1Q9Y2Z2 717 aaKnown RBP7.56□□□□□ -1.2
MSH6-211ENST00000606499 PCDHB1Q9Y5F3 818 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 DGKBQ9Y6T7 804 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 CACNA1EQ15878 2313 aa7.56□□□□□ -1.2
MSH6-211ENST00000606499 TDRD6O60522 2096 aaKnown RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 HMX2A2RU54 273 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 FOXO6A8MYZ6 492 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 E5RI56 91 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 H3BMM5 538 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 QSOX1O00391 747 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 KHNYNO15037 678 aaKnown RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 POP7O75817 140 aaKnown RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 PIAS2O75928 621 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 TNFP01375 233 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 ITGA2BP08514 1039 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 CTSEP14091 401 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 CHRM3P20309 590 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 AK4P27144 223 aaPredicted RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 CCR7P32248 378 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 SPRP35270 261 aaPredicted RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 MSH2P43246 934 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 PREPP48147 710 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 ARRB1P49407 418 aaPredicted RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 CLCN7P51798 805 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 HNRNPKP61978 463 aaKnown RBP eCLIP7.55□□□□□ -1.2
MSH6-211ENST00000606499 TIAL1Q01085 375 aaKnown RBP eCLIP7.55□□□□□ -1.2
MSH6-211ENST00000606499 CTBSQ01459 385 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 IFFO1Q0D2I5 559 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 BNIP3Q12983 259 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 NFE2L1Q14494 772 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 ZNF460Q14592 562 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 ZNF423Q2M1K9 1284 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 ZNF658BQ4V348 819 aaPredicted RBP7.55□□□□□ -1.2
MSH6-211ENST00000606499 SYTL3Q4VX76 610 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 GRTP1Q5TC63 336 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 MROH9Q5TGP6 573 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 HECTD2Q5U5R9 776 aa7.55□□□□□ -1.2
MSH6-211ENST00000606499 FAM45BPQ6NSW5 357 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms