RNA–Protein interactions for RNA: ENST00000594552.5

CAPN12-204, Transcript of calpain 12, humanhuman

TSL 2

Gene CAPN12, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-204ENST00000594552 LRRC40Q9H9A6 602 aa12.82□□□□□ -0.36
CAPN12-204ENST00000594552 KLC4Q9NSK0 619 aa12.82□□□□□ -0.36
CAPN12-204ENST00000594552 TRMT1Q9NXH9 659 aaKnown RBP12.82□□□□□ -0.36
CAPN12-204ENST00000594552 ATXN10Q9UBB4 475 aa12.82□□□□□ -0.36
CAPN12-204ENST00000594552 CPNE7Q9UBL6 633 aa12.82□□□□□ -0.36
CAPN12-204ENST00000594552 ZNF148Q9UQR1 794 aa12.82□□□□□ -0.36
CAPN12-204ENST00000594552 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
CAPN12-204ENST00000594552 PCDHGA3Q9Y5H0 932 aa12.82□□□□□ -0.36
CAPN12-204ENST00000594552 B3GALT1Q9Y5Z6 326 aa12.82□□□□□ -0.36
CAPN12-204ENST00000594552 ATMQ13315 3056 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 COL6A6A6NMZ7 2263 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 LILRA5A6NI73 299 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 B4E171 279 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 NUAK1O60285 661 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 RAD1O60671 282 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 PPFIA2O75334 1257 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 ZIC2O95409 532 aaPredicted RBP12.81□□□□□ -0.36
CAPN12-204ENST00000594552 VIPP01282 170 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 ZNF8P17098 575 aaPredicted RBP12.81□□□□□ -0.36
CAPN12-204ENST00000594552 AMD1P17707 334 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 CXCR5P32302 372 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 TSPAN7P41732 249 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 SQSTM1Q13501 440 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 LONRF2Q1L5Z9 754 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 ANKS6Q68DC2 871 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 KCTD11Q693B1 232 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 IYDQ6PHW0 289 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 WDR74Q6RFH5 385 aaPredicted RBP12.81□□□□□ -0.36
CAPN12-204ENST00000594552 DTX1Q86Y01 620 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 PLXDC1Q8IUK5 500 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 TRAPPC5Q8IUR0 188 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 SLC35F6Q8N357 371 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 RASGEF1CQ8N431 466 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 BLOC1S5Q8TDH9 187 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 WDR24Q96S15 920 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 C19orf43Q9BQ61 176 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 TBL1YQ9BQ87 522 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 ZPBPQ9BS86 351 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 ARNT2Q9HBZ2 717 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 TRIM39Q9HCM9 518 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.81□□□□□ -0.36
CAPN12-204ENST00000594552 CNOT6Q9ULM6 557 aaKnown RBP12.81□□□□□ -0.36
CAPN12-204ENST00000594552 TTC7AQ9ULT0 858 aaPredicted RBP12.81□□□□□ -0.36
CAPN12-204ENST00000594552 PKP3Q9Y446 797 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 KALRNO60229 2985 aa12.81□□□□□ -0.36
CAPN12-204ENST00000594552 CES2O00748 559 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 AURKAO14965 403 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 PSMD3O43242 534 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 VEGFDO43915 354 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 RASSF9O75901 435 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 CDK14O94921 469 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 METTL18O95568 372 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 AP2A1O95782 977 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 EML2O95834 649 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 AGTP01019 485 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 IFNB1P01574 187 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 FAM87AP0C7U9 286 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 BPIP17213 487 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 UGT1A3P35503 534 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 FDFT1P37268 417 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 HALP42357 657 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 PDE1BQ01064 536 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 SNX1Q13596 522 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 TAF1AQ15573 450 aaPredicted RBP12.8□□□□□ -0.36
CAPN12-204ENST00000594552 ZNF648Q5T619 568 aaPredicted RBP12.8□□□□□ -0.36
CAPN12-204ENST00000594552 LINC00523Q86TU6 105 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 TTC30BQ8N4P2 665 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 GPR26Q8NDV2 337 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 CXorf40BQ96DE9 158 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 TIMM29Q9BSF4 260 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 EFHD1Q9BUP0 239 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 GPN2Q9H9Y4 310 aaPredicted RBP12.8□□□□□ -0.36
CAPN12-204ENST00000594552 PRDM8Q9NQV8 689 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 OCIAD1Q9NX40 245 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 PAK5Q9P286 719 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 VPS9D1Q9Y2B5 631 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 PCYT1BQ9Y5K3 369 aaPredicted RBP12.8□□□□□ -0.36
CAPN12-204ENST00000594552 SDK2Q58EX2 2172 aa12.8□□□□□ -0.36
CAPN12-204ENST00000594552 C2orf81A6NN90 581 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 USP27XA6NNY8 438 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 ZNF891A8MT65 544 aaPredicted RBP12.79□□□□□ -0.36
CAPN12-204ENST00000594552 PGRMC1O00264 195 aaKnown RBP12.79□□□□□ -0.36
CAPN12-204ENST00000594552 POLR1CO15160 346 aaPredicted RBP12.79□□□□□ -0.36
CAPN12-204ENST00000594552 MTX2O75431 263 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 CRTAMO95727 393 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 LIFP15018 202 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 ZNF7P17097 686 aaPredicted RBP12.79□□□□□ -0.36
CAPN12-204ENST00000594552 SPAM1P38567 509 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 CYP4F2P78329 520 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 FOXM1Q08050 763 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 CYB5D1Q6P9G0 228 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 C4orf22Q6V702 233 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 ADGRG6Q86SQ4 1221 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 NLGN4XQ8N0W4 816 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 NLGN4YQ8NFZ3 816 aaPredicted RBP12.79□□□□□ -0.36
CAPN12-204ENST00000594552 BRSK1Q8TDC3 778 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 NKD1Q969G9 470 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 PMEPA1Q969W9 287 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 VPS35Q96QK1 796 aa12.79□□□□□ -0.36
CAPN12-204ENST00000594552 OSBPL9Q96SU4 736 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms