RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 PKP3Q9Y446 797 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 KCTD3Q9Y597 815 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 DUSP10Q9Y6W6 482 aa14.07□□□□□ -0.16
VMP1-206ENST00000587945 SOWAHDA6NJG2 315 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 APOC4-APOC2K7ER74 178 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 STX7O15400 261 aaKnown RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 APOC2P02655 101 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 SFTPCP11686 197 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 F8A1P23610 371 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 CYLC1P35663 651 aaPredicted RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 HALP42357 657 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 POLE2P56282 527 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 OTUD4Q01804 1114 aaKnown RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 ABHD18Q0P651 414 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 XRCC4Q13426 336 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 RPE65Q16518 533 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 LDLRAP1Q5SW96 308 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 FNBP1LQ5T0N5 605 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 ATP1A1-AS1Q5TC04 95 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 CACHD1Q5VU97 1274 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 PTRH1Q86Y79 214 aaKnown RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 BEND7Q8N7W2 519 aaPredicted RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 DDHD1Q8NEL9 900 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 ACTL9Q8TC94 416 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 ZNF398Q8TD17 642 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 DTX3LQ8TDB6 740 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 ULBP3Q9BZM4 244 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 ZCCHC2Q9C0B9 1178 aaKnown RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 SLC25A18Q9H1K4 315 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 ZNF768Q9H5H4 540 aaKnown RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 PCDHA3Q9Y5H8 950 aa14.06□□□□□ -0.16
VMP1-206ENST00000587945 MRPS18BQ9Y676 258 aaKnown RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 CFAP20Q9Y6A4 193 aaKnown RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 EPN1Q9Y6I3 576 aaPredicted RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 FLNBO75369 2602 aaKnown RBP14.06□□□□□ -0.16
VMP1-206ENST00000587945 BOD1L1Q8NFC6 3051 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 PPFIA2O75334 1257 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 WISP1O95388 367 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 PSMB4P28070 264 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 OAS2P29728 719 aaKnown RBP14.05□□□□□ -0.16
VMP1-206ENST00000587945 AKT1P31749 480 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 CTNNA1P35221 906 aaKnown RBP14.05□□□□□ -0.16
VMP1-206ENST00000587945 ADRA1AP35348 466 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 STAT5AP42229 794 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 GEMP55040 296 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 KCNC4Q03721 635 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 DMPKQ09013 629 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 KCNAB2Q13303 367 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 ITGA9Q13797 1035 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 C16orf46Q6P387 395 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 MICALCLQ6ZW33 695 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 PRSS42Q7Z5A4 293 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 RBM12BQ8IXT5 1001 aaKnown RBP14.05□□□□□ -0.16
VMP1-206ENST00000587945 ESX1Q8N693 406 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 GALNT6Q8NCL4 622 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 OR4K2Q8NGD2 314 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 STARD8Q92502 1023 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 ZDHHC12Q96GR4 267 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 OSBPL8Q9BZF1 889 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 TRIT1Q9H3H1 467 aaKnown RBP14.05□□□□□ -0.16
VMP1-206ENST00000587945 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.05□□□□□ -0.16
VMP1-206ENST00000587945 FAM8A1Q9UBU6 413 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 FKBPLQ9UIM3 349 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 RPS6KL1Q9Y6S9 549 aa14.05□□□□□ -0.16
VMP1-206ENST00000587945 IGHV5-51A0A0C4DH38 117 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 TOX3O15405 576 aaPredicted RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 KCNN4O15554 427 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 PJA2O43164 708 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 SUV39H1O43463 412 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 KCNJ13O60928 360 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 ANXA9O76027 345 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 KIAA0754O94854 1291 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 NDUFA10O95299 355 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 PRAMEF1O95521 474 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 MSH3P20585 1137 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 LPOP22079 712 aaPredicted RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 FECHP22830 423 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 CCR10P46092 362 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 NAP1L1P55209 391 aaKnown RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 EIF3EP60228 445 aaKnown RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 COPS2P61201 443 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 CDC20Q12834 499 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 SPARCL1Q14515 664 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 KCNAB1Q14722 419 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 DEFB109BQ30KR1 87 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 ANKRD20A2Q5SQ80 823 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 ANKRD20A1Q5TYW2 823 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 ANKRD20A3Q5VUR7 823 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 ITPRIPL1Q6GPH6 555 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 DUS1LQ6P1R4 473 aaKnown RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 DARS2Q6PI48 645 aaKnown RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 C6orf15Q6UXA7 325 aaPredicted RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 RANBP10Q6VN20 620 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 RASGRP3Q8IV61 690 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 CCDC110Q8TBZ0 833 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 KLHL6Q8WZ60 621 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 CATSPER2Q96P56 530 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 EFHD1Q9BUP0 239 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 CLMPQ9H6B4 373 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms