RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 ARHGAP25P42331 645 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 NR2C2P49116 596 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 MLLT10P55197 1068 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 TUBB3Q13509 450 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 MESDQ14696 234 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 RPE65Q16518 533 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 UGT8Q16880 541 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 ASTE1Q2TB18 679 aaPredicted RBP7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 LDLRAP1Q5SW96 308 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 LRRC38Q5VT99 294 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 PWWP2BQ6NUJ5 590 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 BZW1Q7L1Q6 419 aaKnown RBP7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 SYVN1Q86TM6 617 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 TMEM135Q86UB9 458 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 OR8K5Q8NH50 307 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 GDAP1Q8TB36 358 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 SLC35G2Q8TBE7 412 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 ZFPM2Q8WW38 1151 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 PACSIN1Q9BY11 444 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 ZCCHC2Q9C0B9 1178 aaKnown RBP7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 ACTL8Q9H568 366 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 BPIFA1Q9NP55 256 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 MLXIPLQ9NP71 852 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 IL26Q9NPH9 171 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 FGF21Q9NSA1 209 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 IL17CQ9P0M4 197 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 TRIM10Q9UDY6 481 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 FAM153AQ9UHL3 310 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 SPO11Q9Y5K1 396 aa7.86□□□□□ -1.15
CAPNS1-203ENST00000586963 NBPF19A0A087WUL8 3843 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 SSU72P8A0A1W2PR75 194 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 BLACEA4D250 179 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 KLHL33A6NCF5 533 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 TLCD2A6NGC4 264 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 VPS4BO75351 444 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 PMPCBO75439 489 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 PDGFAP04085 211 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 PTPN3P26045 913 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 SPAM1P38567 509 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 WNT3AP56704 352 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 PPP1CAP62136 330 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 RPS15P62841 145 aaKnown RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 HSD11B2P80365 405 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 PDE1BQ01064 536 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 LAMB3Q13751 1172 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 ITGA9Q13797 1035 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 FAM182AQ5T1J6 154 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 METRNLQ641Q3 311 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 TMEM220Q6QAJ8 160 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 KDELC1Q6UW63 502 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 NPNTQ6UXI9 565 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 ZNF517Q6ZMY9 492 aaPredicted RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 RFX6Q8HWS3 928 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 LURAP1LQ8IV03 231 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 CARFQ8N187 725 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 D2HGDHQ8N465 521 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 TTC30BQ8N4P2 665 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 BEND7Q8N7W2 519 aaPredicted RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 RASGEF1AQ8N9B8 481 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 GALNT11Q8NCW6 608 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 DDHD1Q8NEL9 900 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 GPR150Q8NGU9 434 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 RNF31Q96EP0 1072 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 ZNF514Q96K75 400 aaPredicted RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 MAP3K3Q99759 626 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 AKIRIN1Q9H9L7 192 aaPredicted RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 LRRC4CQ9HCJ2 640 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 LATS2Q9NRM7 1088 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 KCND1Q9NSA2 647 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 DDX56Q9NY93 547 aaKnown RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 HACD3Q9P035 362 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 VPS4AQ9UN37 437 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 FARSAQ9Y285 508 aaKnown RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 PCDHGB7Q9Y5F8 929 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 PCDHGA9Q9Y5G4 932 aaKnown RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 UTP20O75691 2785 aaKnown RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 NOTCH2Q04721 2471 aa7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 SPTAN1Q13813 2472 aaKnown RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 RP1L1Q8IWN7 2480 aaPredicted RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 PRRC2CQ9Y520 2896 aaKnown RBP7.85□□□□□ -1.15
CAPNS1-203ENST00000586963 GLYATL1P3A0A0U1RQE8 302 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 UBA6A0AVT1 1052 aaPredicted RBP7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 OR5K3A6NET4 321 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 TTLL8A6PVC2 850 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 UGT1A9O60656 530 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 CPNE3O75131 537 aaKnown RBP7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 DNAJB5O75953 348 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 ZBTB11O95625 1053 aaPredicted RBP7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 EBLN1P0CF75 366 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 MTHFD1P11586 935 aaKnown RBP7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 UGT1A6P19224 532 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 HLA-DPA1P20036 260 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 LPOP22079 712 aaPredicted RBP7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 UGT1A1P22309 533 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 UGT1A4P22310 534 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 CD68P34810 354 aaPredicted RBP7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 SLC1A1P43005 524 aa7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 TNNT3P45378 269 aaPredicted RBP7.84□□□□□ -1.15
CAPNS1-203ENST00000586963 ARL4DP49703 201 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms