RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 RFX6Q8HWS3 928 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 PLD5Q8N7P1 536 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 CT55Q8WUE5 264 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 SLC41A2Q96JW4 573 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 PSMG3-AS1Q96PY0 264 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 ACTL8Q9H568 366 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 BPIFA1Q9NP55 256 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 DDX56Q9NY93 547 aaKnown RBP17.54■□□□□ 0.4
MKS1-209ENST00000580127 FAM153AQ9UHL3 310 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 PKP3Q9Y446 797 aa17.54■□□□□ 0.4
MKS1-209ENST00000580127 POP7O75817 140 aaKnown RBP17.53■□□□□ 0.4
MKS1-209ENST00000580127 TMEM253P0C7T8 217 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 PBX1P40424 430 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 PGDP52209 483 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 DMPKQ09013 629 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 TFDP2Q14188 446 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 UGT8Q16880 541 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 DNTTIP2Q5QJE6 756 aaKnown RBP17.53■□□□□ 0.4
MKS1-209ENST00000580127 FHL5Q5TD97 284 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 LRRC38Q5VT99 294 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 PWWP2BQ6NUJ5 590 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 SYVN1Q86TM6 617 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 CARFQ8N187 725 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 GALNT11Q8NCW6 608 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 TADA1Q96BN2 335 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 TEKT5Q96M29 485 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 CEP41Q9BYV8 373 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 ACSS2Q9NR19 701 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 FGF21Q9NSA1 209 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 SEMA5BQ9P283 1151 aa17.53■□□□□ 0.4
MKS1-209ENST00000580127 USP9YO00507 2555 aaPredicted RBP17.52■□□□□ 0.4
MKS1-209ENST00000580127 IGHV5-51A0A0C4DH38 117 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 TLCD2A6NGC4 264 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 AKR1B10O60218 316 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 AGFG2O95081 481 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 MT-CYBP00156 380 aaPredicted RBP17.52■□□□□ 0.4
MKS1-209ENST00000580127 FURINP09958 794 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 PYGMP11217 842 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 VARSP26640 1264 aaKnown RBP17.52■□□□□ 0.4
MKS1-209ENST00000580127 HNRNPH3P31942 346 aaKnown RBP17.52■□□□□ 0.4
MKS1-209ENST00000580127 XRCC4Q13426 336 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 RPE65Q16518 533 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 LONRF2Q1L5Z9 754 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 TMEM220Q6QAJ8 160 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 SPATA22Q8NHS9 363 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 SLC35G2Q8TBE7 412 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 TFB1MQ8WVM0 346 aaKnown RBP17.52■□□□□ 0.4
MKS1-209ENST00000580127 RNF31Q96EP0 1072 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 SLC25A23Q9BV35 468 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 IL26Q9NPH9 171 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 KCND1Q9NSA2 647 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 HRASLS2Q9NWW9 162 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 ACSL5Q9ULC5 683 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 FARSAQ9Y285 508 aaKnown RBP17.52■□□□□ 0.4
MKS1-209ENST00000580127 COLEC10Q9Y6Z7 277 aa17.52■□□□□ 0.4
MKS1-209ENST00000580127 SPTBN1Q01082 2364 aaKnown RBP17.51■□□□□ 0.39
MKS1-209ENST00000580127 BLACEA4D250 179 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 CPNE3O75131 537 aaKnown RBP17.51■□□□□ 0.39
MKS1-209ENST00000580127 TPM1P09493 284 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 FOLR1P15328 257 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 NR1D1P20393 614 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 MSH3P20585 1137 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 SPAM1P38567 509 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 SLC1A1P43005 524 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 GSDMDP57764 484 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 TUBB4BP68371 445 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 TUBB2AQ13885 445 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 KRT33BQ14525 404 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 C11orf96Q7Z7L8 435 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 OOSP2Q86WS3 158 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 CPNE8Q86YQ8 564 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 TMEM126BQ8IUX1 230 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 RHOT2Q8IXI1 618 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 RHOT1Q8IXI2 618 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 OR8K1Q8NGG5 319 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 MR1Q95460 341 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 VAT1Q99536 393 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 TUBB2BQ9BVA1 445 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 PSMD13Q9UNM6 376 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 WDR37Q9Y2I8 494 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 PCDHGB7Q9Y5F8 929 aa17.51■□□□□ 0.39
MKS1-209ENST00000580127 PCDHGA9Q9Y5G4 932 aaKnown RBP17.51■□□□□ 0.39
MKS1-209ENST00000580127 GLYATL1P3A0A0U1RQE8 302 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 LOC285095A0A1B0GVY8 99 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 K7EM74 188 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 ZBTB11O95625 1053 aaPredicted RBP17.5■□□□□ 0.39
MKS1-209ENST00000580127 KRT1P04264 644 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 GYPCP04921 128 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 CCL11P51671 97 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 WNT3AP56704 352 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 DYNLT1P63172 113 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 PRKAA1Q13131 559 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 GSE1Q14687 1217 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 CHRNA6Q15825 494 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 KHDC1Q4VXA5 237 aaKnown RBP17.5■□□□□ 0.39
MKS1-209ENST00000580127 METRNLQ641Q3 311 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 TMEM135Q86UB9 458 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 LUZP1Q86V48 1076 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 HPS6Q86YV9 775 aa17.5■□□□□ 0.39
MKS1-209ENST00000580127 D2HGDHQ8N465 521 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms