RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 KLHDC9Q8NEP7 349 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 SNX19Q92543 992 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 LINGO1Q96FE5 620 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 HBEGFQ99075 208 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 CGREF1Q99674 301 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 TMEM45AQ9NWC5 275 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 PATJQ8NI35 1801 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 GMNNO75496 209 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 PRSS23O95084 383 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 MTHFRP42898 656 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 DGKQP52824 942 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 CBX2Q14781 532 aaPredicted RBP15.45■□□□□ 0.06
NUP88-207ENST00000573584 TGFBIQ15582 683 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 SLC44A4Q53GD3 710 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 XAF1Q6GPH4 301 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 DCDC5Q6ZRR9 648 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 CFAP52Q8N1V2 620 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 MDGA1Q8NFP4 955 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 METTL6Q8TCB7 284 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 C8orf48Q96LL4 319 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 SMIM14Q96QK8 99 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 PDFQ9HBH1 243 aa15.45■□□□□ 0.06
NUP88-207ENST00000573584 FNDC3AQ9Y2H6 1198 aaKnown RBP15.45■□□□□ 0.06
NUP88-207ENST00000573584 C2orf81A6NN90 581 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 OCM2P0CE71 109 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 OCMP0CE72 109 aaPredicted RBP15.44■□□□□ 0.06
NUP88-207ENST00000573584 PKMP14618 531 aaKnown RBP15.44■□□□□ 0.06
NUP88-207ENST00000573584 MAPKAPK2P49137 400 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 LETMD1Q6P1Q0 360 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 IL27RAQ6UWB1 636 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 PRR23BQ6ZRT6 265 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 R3HCC1LQ7Z5L2 792 aaKnown RBP15.44■□□□□ 0.06
NUP88-207ENST00000573584 ZDHHC13Q8IUH4 622 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 PIANPQ8IYJ0 282 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 FBXO32Q969P5 355 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 ZNF382Q96SR6 550 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 LHPPQ9H008 270 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 COMMD8Q9NX08 183 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 GRXCR2A6NFK2 248 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 J3QRK9 145 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 ABCB7O75027 752 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 CAPN1P07384 714 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 CRHBPP24387 322 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 CD97P48960 835 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 TUBA3CQ13748 450 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 TAF1AQ15573 450 aaPredicted RBP15.44■□□□□ 0.06
NUP88-207ENST00000573584 NFE2Q16621 373 aaPredicted RBP15.44■□□□□ 0.06
NUP88-207ENST00000573584 C8orf59Q8N0T1 100 aaPredicted RBP15.44■□□□□ 0.06
NUP88-207ENST00000573584 RAB2BQ8WUD1 216 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 SDCCAG3Q96C92 435 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 FBXL8Q96CD0 374 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 EXOC2Q96KP1 924 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 TOR3AQ9H497 397 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 HPS4Q9NQG7 708 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 HEBP1Q9NRV9 189 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.44■□□□□ 0.06
NUP88-207ENST00000573584 PSME2Q9UL46 239 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 MYO16Q9Y6X6 1858 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 G3V2T6 193 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 GGT1P19440 569 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 BFSP2Q13515 415 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 AAK1Q2M2I8 961 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 PSAPL1Q6NUJ1 521 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 CYP20A1Q6UW02 462 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 SLC15A4Q8N697 577 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 TTC9BQ8N6N2 239 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 ATAD1Q8NBU5 361 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 SGCDQ92629 289 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 FUBP3Q96I24 572 aaKnown RBP eCLIP15.44■□□□□ 0.06
NUP88-207ENST00000573584 NSMCE3Q96MG7 304 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 ZBED2Q9BTP6 218 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 ACTL8Q9H568 366 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 SARS2Q9NP81 518 aaKnown RBP15.44■□□□□ 0.06
NUP88-207ENST00000573584 VPS9D1Q9Y2B5 631 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 COQ6Q9Y2Z9 468 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 SLC30A1Q9Y6M5 507 aa15.44■□□□□ 0.06
NUP88-207ENST00000573584 IQCA1LA6NCM1 817 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 MOXD2PA6NHM9 499 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 ARNTLO00327 626 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 ATP6V1G1O75348 118 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 OAZ2O95190 189 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 IL7RP16871 459 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 TPP2P29144 1249 aaPredicted RBP15.43■□□□□ 0.06
NUP88-207ENST00000573584 HTR6P50406 440 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 DSC3Q14574 896 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 NR6A1Q15406 480 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 RBM48Q5RL73 367 aaKnown RBP15.43■□□□□ 0.06
NUP88-207ENST00000573584 ALG1LQ6GMV1 187 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 NADSYN1Q6IA69 706 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 CENPSQ8N2Z9 138 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 CD200R1Q8TD46 325 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 FIG4Q92562 907 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 AURKBQ96GD4 344 aaPredicted RBP15.43■□□□□ 0.06
NUP88-207ENST00000573584 MGME1Q9BQP7 344 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 C17orf80Q9BSJ5 609 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 SPON2Q9BUD6 331 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 EVLQ9UI08 416 aaPredicted RBP15.43■□□□□ 0.06
NUP88-207ENST00000573584 C1orf232A0A0U1RR37 186 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 B4GALT3O60512 393 aa15.43■□□□□ 0.06
NUP88-207ENST00000573584 KCNH1O95259 989 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms