RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 OPA1O60313 960 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 VAPBO95292 243 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 PROS1P07225 676 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 GPR89BP0CG08 455 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 F3P13726 295 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 ATP1B2P14415 290 aaPredicted RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 ITGB6P18564 788 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 PDHA2P29803 388 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 SLC19A1P41440 591 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 CLCNKAP51800 687 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 OR1D5P58170 312 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 UBE2IP63279 158 aaKnown RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 PRAMEP78395 509 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 CFHR1Q03591 330 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 DMPKQ09013 629 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 LRP8Q14114 963 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 BBS9Q3SYG4 887 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 GPR33Q49SQ1 333 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 CTSL3PQ5NE16 218 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 UBAP2Q5T6F2 1119 aaKnown RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 HES3Q5TGS1 186 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 CDCP2Q5VXM1 449 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 KIAA0930Q6ICG6 404 aaPredicted RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 IYDQ6PHW0 289 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 UNQ6494/PRO21346Q6UXR6 183 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 SYDE1Q6ZW31 735 aaPredicted RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 CENPUQ71F23 418 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 TMPRSS7Q7RTY8 843 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 ZNF438Q7Z4V0 828 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 TMEM135Q86UB9 458 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 HOOK3Q86VS8 718 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 DENND6AQ8IWF6 608 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 KRT222Q8N1A0 295 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 SFRP1Q8N474 314 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 Q8N9G6 341 aaPredicted RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 GPR150Q8NGU9 434 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 JPH3Q8WXH2 748 aaPredicted RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 PEX13Q92968 403 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 ULK4Q96C45 1275 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 SNF8Q96H20 258 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 SGSM3Q96HU1 749 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 LINC00615Q96LM1 132 aaPredicted RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 RUNDC3BQ96NL0 473 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 INSM2Q96T92 566 aaPredicted RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 COPS8Q99627 209 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 CCDC3Q9BQI4 270 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 ERP44Q9BS26 406 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 TIMM29Q9BSF4 260 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 XAB2Q9HCS7 855 aaKnown RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 LRIT1Q9P2V4 623 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 GALPQ9UBC7 116 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 PSMD13Q9UNM6 376 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 CHMP2BQ9UQN3 213 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 APOBEC2Q9Y235 224 aaKnown RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 PCDHB1Q9Y5F3 818 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 PCDHGA1Q9Y5H4 931 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 CFAP20Q9Y6A4 193 aaKnown RBP6.86□□□□□ -1.31
SMG6-209ENST00000571442 RPS6KL1Q9Y6S9 549 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 AKAP13Q12802 2813 aa6.86□□□□□ -1.31
SMG6-209ENST00000571442 KNTC1P50748 2209 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 MGAT4DA6NG13 374 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 C1QTNF9BB2RNN3 333 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 E7ESA3 106 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 NTN3O00634 580 aaPredicted RBP6.85□□□□□ -1.31
SMG6-209ENST00000571442 CD3EAPO15446 510 aaKnown RBP6.85□□□□□ -1.31
SMG6-209ENST00000571442 PIAS1O75925 651 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 POLBP06746 335 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 C1QTNF9P0C862 333 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 GLB1P16278 677 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 GABRB3P28472 473 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 CSF2RBP32927 897 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 ELK3P41970 407 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 ABCG1P45844 678 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 PREPP48147 710 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 PGGT1BP53609 377 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 MPP1Q00013 466 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 CTBP1Q13363 440 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 CAMK2BQ13554 666 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 GTF2H3Q13889 308 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 ITIH4Q14624 930 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 CRYMQ14894 314 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 NR1D2Q14995 579 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 MORF4L2Q15014 288 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 BRD3Q15059 726 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 RPE65Q16518 533 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 WHAMMP3Q1A5X7 153 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 TYSND1Q2T9J0 566 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 FASTKD1Q53R41 847 aaKnown RBP6.85□□□□□ -1.31
SMG6-209ENST00000571442 NKAIN2Q5VXU1 208 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 METRNLQ641Q3 311 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 CASC4Q6P4E1 433 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 TRMT10BQ6PF06 316 aaKnown RBP6.85□□□□□ -1.31
SMG6-209ENST00000571442 ABRAXAS1Q6UWZ7 409 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 PACS1Q6VY07 963 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 UNC5AQ6ZN44 842 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 ZNF574Q6ZN55 896 aaPredicted RBP6.85□□□□□ -1.31
SMG6-209ENST00000571442 NLRP9Q7RTR0 991 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 SPRED1Q7Z699 444 aa6.85□□□□□ -1.31
SMG6-209ENST00000571442 B3GNT8Q7Z7M8 397 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms