RNA–Protein interactions for RNA: ENST00000560878.1

SPG21-212, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-212ENST00000560878 CNGA3Q16281 694 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 TAZQ16635 292 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 PARP6Q2NL67 630 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 ZNF542PQ5EBM4 170 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 ANKRD20A2Q5SQ80 823 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 ANKRD20A1Q5TYW2 823 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 ANKRD20A3Q5VUR7 823 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 LRRC66Q68CR7 880 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 ESRP1Q6NXG1 681 aaKnown RBP4.79□□□□□ -1.64
SPG21-212ENST00000560878 ZNF449Q6P9G9 518 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 DOK6Q6PKX4 331 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 C4orf22Q6V702 233 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 KYAT3Q6YP21 454 aaKnown RBP4.79□□□□□ -1.64
SPG21-212ENST00000560878 UNC5AQ6ZN44 842 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 TTLL10Q6ZVT0 673 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 TAF8Q7Z7C8 310 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 LINC00523Q86TU6 105 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 GKN2Q86XP6 184 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 GATAD2AQ86YP4 633 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 SLC13A5Q86YT5 568 aaPredicted RBP4.79□□□□□ -1.64
SPG21-212ENST00000560878 NRSN1Q8IZ57 195 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 ZNF567Q8N184 647 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 EID2Q8N6I1 236 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 DNAAF3Q8N9W5 541 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 TMEM52Q8NDY8 209 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 OR2I1PQ8NGU4 316 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 OR6P1Q8NGX9 317 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 SPATA22Q8NHS9 363 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 BLOC1S5Q8TDH9 187 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 LMX1AQ8TE12 382 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 GRK7Q8WTQ7 553 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 ALG3Q92685 438 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 ECHDC3Q96DC8 303 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 IMP4Q96G21 291 aaKnown RBP4.79□□□□□ -1.64
SPG21-212ENST00000560878 PBKQ96KB5 322 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 WDR92Q96MX6 357 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 SPATA13Q96N96 652 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 OLFM3Q96PB7 478 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 FERD3LQ96RJ6 166 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 FAM118BQ9BPY3 351 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 APOOQ9BUR5 198 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 TDRD1Q9BXT4 1180 aaKnown RBP4.79□□□□□ -1.64
SPG21-212ENST00000560878 CDH19Q9H159 772 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 GBA3Q9H227 469 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 FAM83DQ9H4H8 585 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 TRABDQ9H4I3 376 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.79□□□□□ -1.64
SPG21-212ENST00000560878 GULP1Q9UBP9 304 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 APOBEC3BQ9UH17 382 aaKnown RBP4.79□□□□□ -1.64
SPG21-212ENST00000560878 ZNHIT2Q9UHR6 403 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 CD84Q9UIB8 345 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 SHOC2Q9UQ13 582 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 OR1A2Q9Y585 309 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 CEP250Q9BV73 2442 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 CFAP54Q96N23 3096 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 PLXND1Q9Y4D7 1925 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 TRPM6Q9BX84 2022 aa4.79□□□□□ -1.64
SPG21-212ENST00000560878 LAMA1P25391 3075 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 MUC22E2RYF6 1773 aaPredicted RBP4.78□□□□□ -1.64
SPG21-212ENST00000560878 KNL1Q8NG31 2342 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 USP34Q70CQ2 3546 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 NYNRINQ9P2P1 1898 aaKnown RBP4.78□□□□□ -1.64
SPG21-212ENST00000560878 A0A0U1RQJ8 604 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 SPTY2D1-AS1A0A0U1RR47 76 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 A0A1B0GTQ1 180 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 A0A1W2PR77 199 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 CPED1A4D0V7 1026 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 C5orf60A6NFR6 353 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 NPIPB15A6NHN6 443 aaPredicted RBP4.78□□□□□ -1.64
SPG21-212ENST00000560878 F8W8V4 182 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 AP3B1O00203 1094 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 PGRMC1O00264 195 aaKnown RBP4.78□□□□□ -1.64
SPG21-212ENST00000560878 CDX4O14627 284 aaPredicted RBP4.78□□□□□ -1.64
SPG21-212ENST00000560878 RAD51BO15315 384 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 INPP4BO15327 924 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 AQP9O43315 295 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 TNFSF14O43557 240 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 PCDHGA12O60330 932 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 GCATO75600 419 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 SLC25A14O95258 325 aaPredicted RBP4.78□□□□□ -1.64
SPG21-212ENST00000560878 TRIM16O95361 564 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 CLDN7O95471 211 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 PEX11BO96011 259 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 MT-CYBP00156 380 aaPredicted RBP4.78□□□□□ -1.64
SPG21-212ENST00000560878 EPOP01588 193 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 WNT1P04628 370 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 PDHA1P08559 390 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 PIRTP0C851 137 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 RALBP11234 206 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 CDK4P11802 303 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 TCP1P17987 556 aaKnown RBP4.78□□□□□ -1.64
SPG21-212ENST00000560878 VCLP18206 1134 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 TGM1P22735 817 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 PSMB4P28070 264 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 CASQ1P31415 396 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 PPARGP37231 505 aaPredicted RBP4.78□□□□□ -1.64
SPG21-212ENST00000560878 FDFT1P37268 417 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 SRP54P61011 504 aaKnown RBP4.78□□□□□ -1.64
SPG21-212ENST00000560878 NIPAL4Q0D2K0 466 aa4.78□□□□□ -1.64
SPG21-212ENST00000560878 ILF3Q12906 894 aaKnown RBP eCLIP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms