RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 NPIPB15A6NHN6 443 aaPredicted RBP7.31□□□□□ -1.24
SPG11-213ENST00000558988 TOR1BO14657 336 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 MFSD11O43934 449 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 SLC4A1P02730 911 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 SERPING1P05155 500 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 CD48P09326 243 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 FAM228BP0C875 321 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 KELP23276 732 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 SERPINB6P35237 376 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 PCK1P35558 622 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 GNPDA1P46926 289 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 CSNK1DP48730 415 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 PEX5P50542 639 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 EPHB1P54762 984 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 MAZP56270 477 aaKnown RBP7.31□□□□□ -1.24
SPG11-213ENST00000558988 KRTAP10-9P60411 292 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 DSC2Q02487 901 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 ABHD18Q0P651 414 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 TRAF2Q12933 501 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 ARHGEF7Q14155 803 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 PIGHQ14442 188 aaPredicted RBP7.31□□□□□ -1.24
SPG11-213ENST00000558988 CNGA3Q16281 694 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 DPYSL2Q16555 572 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 ATP13A4Q4VNC1 1196 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 BOLA3Q53S33 107 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 FAM182AQ5T1J6 154 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 PHF19Q5T6S3 580 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 MARC1Q5VT66 337 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 PNCKQ6P2M8 343 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 SLC30A9Q6PML9 568 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 CRTC3Q6UUV7 619 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 USP45Q70EL2 814 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 MARK2Q7KZI7 788 aaKnown RBP7.31□□□□□ -1.24
SPG11-213ENST00000558988 GPR155Q7Z3F1 870 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 HSD11B1LQ7Z5J1 315 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 TSPAN33Q86UF1 283 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 TRIM74Q86UV6 250 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 HEATR4Q86WZ0 1026 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 PSTKQ8IV42 348 aaKnown RBP7.31□□□□□ -1.24
SPG11-213ENST00000558988 LSMEM2Q8N112 164 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 LZTR1Q8N653 840 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 HCAR2Q8TDS4 363 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 ZNF578Q96N58 590 aaPredicted RBP7.31□□□□□ -1.24
SPG11-213ENST00000558988 PSKH2Q96QS6 385 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 SEMA3CQ99985 751 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 ISCUQ9H1K1 167 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 PRORYQ9H606 182 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 ASCL3Q9NQ33 180 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 CTTNBP2NLQ9P2B4 639 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 IP6K2Q9UHH9 426 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 LUC7L2Q9Y383 392 aaKnown RBP7.31□□□□□ -1.24
SPG11-213ENST00000558988 CFAP47Q6ZTR5 3102 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 LRP4O75096 1905 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 TRBV23OR9-2A0A075B6M9 112 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 CCDC187A0A096LP49 1063 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 PRSS38A1L453 326 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 RHPN2P1A8MT19 583 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 D6RAR5 112 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 MYO1FO00160 1098 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 TRAFD1O14545 582 aaPredicted RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 INPP4BO15327 924 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 MAFKO60675 156 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 HEXIM1O94992 359 aaKnown RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 BPNT1O95861 308 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 JMJD7P0C870 316 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 CYP2A6P11509 494 aaPredicted RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 KRT10P13645 584 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 TNNT1P13805 278 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 LHCGRP22888 699 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 NFKBIAP25963 317 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 AK4P27144 223 aaPredicted RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 ALDH4A1P30038 563 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 CASP14P31944 242 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 THBS2P35442 1172 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 POLD2P49005 469 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 HCAR3P49019 387 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 ZNF135P52742 658 aaPredicted RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 PDX1P52945 283 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 MAPK10P53779 464 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 INHBCP55103 352 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 TMPRSS3P57727 454 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 KIAA1024LP59773 190 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 ZBED6P86452 979 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 SLC25A11Q02978 314 aaKnown RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 FOXE3Q13461 319 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 HADHQ16836 314 aaKnown RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 MAP9Q49MG5 647 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 ARMC12Q5T9G4 340 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 SPECC1LQ69YQ0 1117 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 ALKBH5Q6P6C2 394 aaKnown RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 BNC2Q6ZN30 1099 aaPredicted RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 RFLNAQ6ZTI6 216 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 Q6ZVL8 140 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 RAB11FIP2Q7L804 512 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 FBXO39Q8N4B4 442 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 ARL14Q8N4G2 192 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 KCTD6Q8NC69 237 aa7.3□□□□□ -1.24
SPG11-213ENST00000558988 WDR36Q8NI36 951 aaKnown RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 ZNF564Q8TBZ8 553 aaPredicted RBP7.3□□□□□ -1.24
SPG11-213ENST00000558988 ECHDC3Q96DC8 303 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms