RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 RTL10Q7L3V2 364 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 NLRP9Q7RTR0 991 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 DNAJB7Q7Z6W7 309 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 PRPF39Q86UA1 669 aaKnown RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 TMEM173Q86WV6 379 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 ARHGAP12Q8IWW6 846 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 LRRC34Q8IZ02 419 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 C4orf33Q8N1A6 199 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 BBS5Q8N3I7 341 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 TEX26Q8N6G2 289 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 OR52K1Q8NGK4 314 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 LRRC8CQ8TDW0 803 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 DEPDC1BQ8WUY9 529 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ARNTL2Q8WYA1 636 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ZNF75CPQ92670 426 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 TRIM43Q96BQ3 446 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 OXNAD1Q96HP4 312 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 TGS1Q96RS0 853 aaKnown RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 YME1L1Q96TA2 773 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 CPNE1Q99829 537 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ELAC2Q9BQ52 826 aaKnown RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 TBL1YQ9BQ87 522 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 MLPHQ9BV36 600 aaPredicted RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 KIFC1Q9BW19 673 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 VN1R3Q9BXE9 311 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 RABEP2Q9H5N1 569 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 MANSC1Q9H8J5 431 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 PLAC1Q9HBJ0 212 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 ARNT2Q9HBZ2 717 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 MPP6Q9NZW5 540 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 EIF2B4Q9UI10 523 aaKnown RBP4.48□□□□□ -1.69
SRP54-212ENST00000556992 GRID1Q9ULK0 1009 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 NEU3Q9UQ49 428 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 TTLL3Q9Y4R7 772 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 INSL6Q9Y581 213 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 NR2E3Q9Y5X4 410 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 RPS6KL1Q9Y6S9 549 aa4.48□□□□□ -1.69
SRP54-212ENST00000556992 MYH9P35579 1960 aaKnown RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 ILVBLA1L0T0 632 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 CCT8L1PA6NM43 557 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 CXorf49A8MYA2 514 aaPredicted RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 FOXO6A8MYZ6 492 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 F5H423 210 aaPredicted RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 KLF11O14901 512 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 COCHO43405 550 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 TIMM44O43615 452 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 KDELR3O43731 214 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 SNX3O60493 162 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 PRAMEF11O60813 436 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 PMPCBO75439 489 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 RFPL1O75677 317 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 FGF18O76093 207 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 CNTN5O94779 1100 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 PAPSS2O95340 614 aaPredicted RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 FGF19O95750 216 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 LATS1O95835 1130 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 HMBSP08397 361 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 NEFHP12036 1026 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 ALADP13716 330 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 TPH1P17752 444 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 HDCP19113 662 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 TAC1P20366 129 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 DNAJB1P25685 340 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 FOXN2P32314 431 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 ADRA1AP35348 466 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 GP5P40197 560 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 FNTBP49356 437 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 MECP2P51608 486 aaKnown RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 CDH4P55283 916 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 WNT3AP56704 352 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 GNA12Q03113 381 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 PPARDQ03181 441 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 ITKQ08881 620 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 IFT88Q13099 833 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 PPIGQ13427 754 aaKnown RBP eCLIP4.47□□□□□ -1.693e-9■□□□□ 8.1
SRP54-212ENST00000556992 EFTUD2Q15029 972 aaKnown RBP eCLIP4.47□□□□□ -1.69
SRP54-212ENST00000556992 PDK4Q16654 411 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 UGP2Q16851 508 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 INSCQ1MX18 579 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 ALFQ53S48 1182 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 TRIM61Q5EBN2 209 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 CERCAMQ5T4B2 595 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 ATG16L1Q676U5 607 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 NAIF1Q69YI7 327 aaPredicted RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 PDPK2PQ6A1A2 396 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 SP5Q6BEB4 398 aaPredicted RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 SYCE2Q6PIF2 218 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 LVRNQ6Q4G3 990 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 C6orf89Q6UWU4 347 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 CHST9Q7L1S5 443 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 RD3Q7Z3Z2 195 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 SPATA21Q7Z572 469 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 CCDC91Q7Z6B0 441 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 TFAP2DQ7Z6R9 452 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 SETD3Q86TU7 594 aaPredicted RBP4.47□□□□□ -1.69
SRP54-212ENST00000556992 LCA5Q86VQ0 697 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 CHSY1Q86X52 802 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 ZNF354CQ86Y25 554 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 DENND1CQ8IV53 801 aa4.47□□□□□ -1.69
SRP54-212ENST00000556992 LGI2Q8N0V4 545 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms