RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 BIRC2Q13490 618 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 SEMA3AQ14563 771 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 SMAD1Q15797 465 aaKnown RBP7.52□□□□□ -1.21
TDP1-214ENST00000556063 KLHL38Q2WGJ6 581 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 UAP1L1Q3KQV9 507 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 KHDC1Q4VXA5 237 aaKnown RBP7.52□□□□□ -1.21
TDP1-214ENST00000556063 TEDDM1Q5T9Z0 273 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 UGT3A1Q6NUS8 523 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 TAOK1Q7L7X3 1001 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 CHST15Q7LFX5 561 aaPredicted RBP7.52□□□□□ -1.21
TDP1-214ENST00000556063 LDB1Q86U70 411 aaPredicted RBP7.52□□□□□ -1.21
TDP1-214ENST00000556063 DENND6AQ8IWF6 608 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 CLDN19Q8N6F1 224 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 AVL9Q8NBF6 648 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 C2CD4AQ8NCU7 369 aaPredicted RBP7.52□□□□□ -1.21
TDP1-214ENST00000556063 ZNF548Q8NEK5 533 aaPredicted RBP7.52□□□□□ -1.21
TDP1-214ENST00000556063 HM13Q8TCT9 377 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 GPBAR1Q8TDU6 330 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 FBF1Q8TES7 1133 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 LPGAT1Q92604 370 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 GLMNQ92990 594 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 FAM122AQ96E09 287 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 LINC00615Q96LM1 132 aaPredicted RBP7.52□□□□□ -1.21
TDP1-214ENST00000556063 PHOX2BQ99453 314 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 CPNE1Q99829 537 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 CCM2Q9BSQ5 444 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 LRRC61Q9BV99 259 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 BOCQ9BWV1 1114 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 TMEM168Q9H0V1 697 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 OSGEPL1Q9H4B0 414 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 PARD6AQ9NPB6 346 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 FSCN3Q9NQT6 498 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 KLC4Q9NSK0 619 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 IL1RAPL1Q9NZN1 696 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 NCKIPSDQ9NZQ3 722 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 RAB21Q9UL25 225 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 ACSL5Q9ULC5 683 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 CRYL1Q9Y2S2 319 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 KNTC1P50748 2209 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 CEP250Q9BV73 2442 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 LRP4O75096 1905 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 OR5K4A6NMS3 321 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 C4orf47A7E2U8 309 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 LIN7AO14910 233 aaPredicted RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 SCAMP1O15126 338 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 OR1I1O60431 355 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 SDC3O75056 442 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 VPS26AO75436 327 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 TRIM16O95361 564 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 FUCA1P04066 466 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 INHBAP08476 426 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 FAM153BP0C7A2 387 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 CHRM3P20309 590 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 SDHBP21912 280 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 PBLDP30039 288 aaPredicted RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 FMO4P31512 558 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 CA5AP35218 305 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 SPRP35270 261 aaPredicted RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 GP5P40197 560 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 SKIV2L2P42285 1042 aaKnown RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 HALP42357 657 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 GRK6P43250 576 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 RPIAP49247 311 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 LIMK1P53667 647 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 SLC12A2P55011 1212 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 CSE1LP55060 971 aaKnown RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 GPX6P59796 221 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 MPP1Q00013 466 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 B4GALNT1Q00973 533 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 IL9RQ01113 521 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 DMPKQ09013 629 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 BNIP3Q12983 259 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 RPA4Q13156 261 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 C1orf61Q13536 156 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 BRD3Q15059 726 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 TTLL9Q3SXZ7 439 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 KBTBD12Q3ZCT8 623 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 FAM153CQ494X1 144 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 SYTL3Q4VX76 610 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 LGSNQ5TDP6 509 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 STPG1Q5TH74 334 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 SLC30A9Q6PML9 568 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 OTOAQ7RTW8 1153 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 STRA8Q7Z7C7 330 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 ZNF547Q8IVP9 402 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 GSPT2Q8IYD1 628 aaKnown RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 UNC5BQ8IZJ1 945 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 PPM1NQ8N819 430 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 FAM46DQ8NEK8 389 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 OR2I1PQ8NGU4 316 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 OR2L2Q8NH16 312 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 NETO1Q8TDF5 533 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 SAP25Q8TEE9 199 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 SETD7Q8WTS6 366 aaKnown RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 UBLCP1Q8WVY7 318 aaPredicted RBP7.51□□□□□ -1.21
TDP1-214ENST00000556063 ASZ1Q8WWH4 475 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 ELMO1Q92556 727 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 TMEM159Q96B96 161 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 VPS39Q96JC1 886 aa7.51□□□□□ -1.21
TDP1-214ENST00000556063 FUT8Q9BYC5 575 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms