RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PARGQ86W56 976 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 DEFB119Q8N690 84 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 CLDN19Q8N6F1 224 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 HM13Q8TCT9 377 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 APOPT1Q96IL0 206 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 SLC6A18Q96N87 628 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 FOPNLQ96NB1 174 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 OR2M4Q96R27 311 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 SH3GL2Q99962 352 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 SELENOSQ9BQE4 189 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 SLC13A1Q9BZW2 595 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 CARS2Q9HA77 564 aaKnown RBP11.04□□□□□ -0.64
SHMT2-220ENST00000555634 LATS2Q9NRM7 1088 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 KLHL42Q9P2K6 505 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 ATXN10Q9UBB4 475 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 ZNHIT2Q9UHR6 403 aa11.04□□□□□ -0.64
SHMT2-220ENST00000555634 NOVA2Q9UNW9 492 aaKnown RBP11.04□□□□□ -0.64
SHMT2-220ENST00000555634 MTO1Q9Y2Z2 717 aaKnown RBP11.04□□□□□ -0.64
SHMT2-220ENST00000555634 DNMT3AQ9Y6K1 912 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-220ENST00000555634 CCDC189A1A4V9 331 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 POM121BA6NF01 834 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 NUAK1O60285 661 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 KDM1AO60341 852 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 NIPSNAP2O75323 286 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 S100BP04271 92 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-220ENST00000555634 RPN2P04844 631 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 SLC35G4P0C7Q5 338 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 SP9P0CG40 484 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 CTSEP14091 401 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 SLC2A4P14672 509 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 ZNF37AP17032 561 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-220ENST00000555634 ZNF8P17098 575 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-220ENST00000555634 HOXD11P31277 338 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-220ENST00000555634 HPDP32754 393 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-220ENST00000555634 GNPDA1P46926 289 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 PPARDQ03181 441 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 ILF3Q12906 894 aaKnown RBP eCLIP11.03□□□□□ -0.64
SHMT2-220ENST00000555634 PLA2G4EQ3MJ16 856 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 ZNF789Q5FWF6 425 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 CTSL3PQ5NE16 218 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 PLEKHS1Q5SXH7 462 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 TMEM220Q6QAJ8 160 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 TIFABQ6ZNK6 161 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 FRA10AC1Q70Z53 315 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 AMZ2Q86W34 360 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 BEND7Q8N7W2 519 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-220ENST00000555634 FRMD1Q8N878 549 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 RASGEF1AQ8N9B8 481 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 CCDC63Q8NA47 563 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 OR13H1Q8NG92 308 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 CEP76Q8TAP6 659 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 INPP5DQ92835 1189 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 GLMNQ92990 594 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 FAM122AQ96E09 287 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 SGF29Q96ES7 293 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 SCYL1Q96KG9 808 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 BIRC8Q96P09 236 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 GPR21Q99679 349 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 TIMM29Q9BSF4 260 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 OSGEPL1Q9H4B0 414 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 CAB39LQ9H9S4 337 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 NMRAL1Q9HBL8 299 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 CYP4F12Q9HCS2 524 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 TM9SF3Q9HD45 589 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 SSU72Q9NP77 194 aaKnown RBP11.03□□□□□ -0.64
SHMT2-220ENST00000555634 FAM8A1Q9UBU6 413 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 DCDC2Q9UHG0 476 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 SLC17A4Q9Y2C5 497 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 GPSM3Q9Y4H4 160 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 OAS3Q9Y6K5 1087 aaKnown RBP11.03□□□□□ -0.64
SHMT2-220ENST00000555634 CACNA1AO00555 2505 aa11.03□□□□□ -0.64
SHMT2-220ENST00000555634 RALGAPA1Q6GYQ0 2036 aa11.02□□□□□ -0.64
SHMT2-220ENST00000555634 C17orf113A0A1B0GUU1 675 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 H0Y8X5 98 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 IFRD1O00458 451 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 PHGDHO43175 533 aaKnown RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 ZWINTO95229 277 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 TNFP01375 233 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 ALDOAP04075 364 aaKnown RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 LTA4HP09960 611 aaKnown RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 PYGBP11216 843 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 BRAFP15056 766 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 ITGB6P18564 788 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 GABRB3P28472 473 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 HALP42357 657 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 ARRB1P49407 418 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 TAS2R39P59534 338 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 SRP54P61011 504 aaKnown RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 MAGOHP61326 146 aaKnown RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 ATP6V0D1P61421 351 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 B4GALNT1Q00973 533 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 HSPA14Q0VDF9 509 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 RPA4Q13156 261 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 ZKSCAN8Q15776 578 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-220ENST00000555634 PLK5Q496M5 336 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 TTC23LQ6PF05 361 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 CMC1Q7Z7K0 106 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 KRT222Q8N1A0 295 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 RAB42Q8N4Z0 105 aa11.02□□□□□ -0.65
SHMT2-220ENST00000555634 SIDT2Q8NBJ9 832 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms