RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	SUV39H1	O43463	412 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PPFIA2	O75334	1257 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	POP7	O75817	140 aa	Known RBP	11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	WISP1	O95388	367 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TIAF1	O95411	115 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	LCA5L	O95447	670 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PSMB4	P28070	264 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	STAT5A	P42229	794 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ATP5O	P48047	213 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	KCNAB2	Q13303	367 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	KCNAB1	Q14722	419 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	AGAP9	Q5VTM2	703 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	C11orf63	Q6NUN7	778 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	C16orf46	Q6P387	395 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	XKR5	Q6UX68	686 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	BBS12	Q6ZW61	710 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	BZW1	Q7L1Q6	419 aa	Known RBP	11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RCOR2	Q8IZ40	523 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	AVL9	Q8NBF6	648 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	GALNT6	Q8NCL4	622 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DDHD1	Q8NEL9	900 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FSD1L	Q9BXM9	530 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TRIM5	Q9C035	493 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SLC25A18	Q9H1K4	315 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	GBA3	Q9H227	469 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TRABD	Q9H4I3	376 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ZNF768	Q9H5H4	540 aa	Known RBP	11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CLMP	Q9H6B4	373 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FKBPL	Q9UIM3	349 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DUSP10	Q9Y6W6	482 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FLNC	Q14315	2725 aa		11.27	□□□□□ -0.61
TUBA1B-208	ENST00000552984	COL12A1	Q99715	3063 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RELN	P78509	3460 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	IGHV5-51	A0A0C4DH38	117 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CCL22	O00626	93 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	MTSS1	O43312	755 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	KIAA0754	O94854	1291 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PRAMEF1	O95521	474 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FURIN	P09958	794 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	HLA-DPA1	P20036	260 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	MAP4	P27816	1152 aa	Known RBP	11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	AKT1	P31749	480 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	OTUD4	Q01804	1114 aa	Known RBP	11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ABHD18	Q0P651	414 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	MPP3	Q13368	585 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RPE65	Q16518	533 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SKIDA1	Q1XH10	827 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DEFB109B	Q30KR1	87 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	FNBP1L	Q5T0N5	605 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CACHD1	Q5VU97	1274 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TMEM220	Q6QAJ8	160 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SARM1	Q6SZW1	724 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	WASH2P	Q6VEQ5	465 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ATG14	Q6ZNE5	492 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PRSS42	Q7Z5A4	293 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DAAM2	Q86T65	1068 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	AMZ2	Q86W34	360 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ACTL9	Q8TC94	416 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RBM41	Q96IZ5	413 aa	Known RBP	11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TTC25	Q96NG3	672 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SRPK1	Q96SB4	655 aa	Known RBP	11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RUFY1	Q96T51	708 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	VAT1	Q99536	393 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ZPBP	Q9BS86	351 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ANP32E	Q9BTT0	268 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	WASH6P	Q9NQA3	447 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	IMP3	Q9NV31	184 aa	Known RBP	11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	HACD3	Q9P035	362 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	LNPEP	Q9UIQ6	1025 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CROT	Q9UKG9	612 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	REXO2	Q9Y3B8	237 aa	Known RBP	11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PKP3	Q9Y446	797 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	RPS6KL1	Q9Y6S9	549 aa		11.26	□□□□□ -0.61
TUBA1B-208	ENST00000552984	HACD1	B0YJ81	288 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	APOC4-APOC2	K7ER74	178 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	STX7	O15400	261 aa	Known RBP	11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DDX3Y	O15523	660 aa	Known RBP	11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PJA2	O43164	708 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	NDUFA10	O95299	355 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	EPO	P01588	193 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	APOC2	P02655	101 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	VCL	P18206	1134 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	NR1D1	P20393	614 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CTNNA1	P35221	906 aa	Known RBP	11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DLST	P36957	453 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	HAL	P42357	657 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TNNT3	P45378	269 aa	Predicted RBP	11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	CCR10	P46092	362 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	ARCN1	P48444	511 aa	Known RBP	11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TMPRSS15	P98073	1019 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	KCNC4	Q03721	635 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	TLE1	Q04724	770 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	DMPK	Q09013	629 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	SPARCL1	Q14515	664 aa		11.25	□□□□□ -0.61
TUBA1B-208	ENST00000552984	PLCL1	Q15111	1095 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms