RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 SCIMPQ6UWF3 145 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 NCSTNQ92542 709 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 NMD3Q96D46 503 aaKnown RBP12.06□□□□□ -0.48
NR4A1-215ENST00000550557 RBM18Q96H35 190 aaKnown RBP12.06□□□□□ -0.48
NR4A1-215ENST00000550557 FAM83CQ9BQN1 747 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 C3orf14Q9HBI5 128 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 NPC1O15118 1278 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 PDE5AO76074 875 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 HIST1H2ABP04908 130 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 ITGB1P05556 798 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 ANPEPP15144 967 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 CRATP43155 626 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 GRIA4P48058 902 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 RPL14P50914 215 aaKnown RBP12.06□□□□□ -0.48
NR4A1-215ENST00000550557 BLMHQ13867 455 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 PACS1Q6VY07 963 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 HIST3H2AQ7L7L0 130 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 SIX5Q8N196 739 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 ZNF248Q8NDW4 579 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 CYGBQ8WWM9 190 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 FGF13Q92913 245 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 HIST1H2ACQ93077 130 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 VPS33AQ96AX1 596 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 BRINP2Q9C0B6 783 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 HCN3Q9P1Z3 774 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 COL5A3P25940 1745 aaPredicted RBP12.06□□□□□ -0.48
NR4A1-215ENST00000550557 FAM220BPB1ANY3 271 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 J3KR12 359 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 PI15O43692 258 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 UGT1A9O60656 530 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 UGT1A6P19224 532 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 UGT1A1P22309 533 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 UGT1A4P22310 534 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 UGT1A3P35503 534 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 UGT1A5P35504 534 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 NRLP54845 237 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 RPS21P63220 83 aaKnown RBP12.06□□□□□ -0.48
NR4A1-215ENST00000550557 CSTF3Q12996 717 aaKnown RBP12.06□□□□□ -0.48
NR4A1-215ENST00000550557 TTC33Q6PID6 262 aaPredicted RBP12.06□□□□□ -0.48
NR4A1-215ENST00000550557 OLFML1Q6UWY5 402 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 RIPOR1Q6ZS17 1223 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 ALYREFQ86V81 257 aaKnown RBP12.06□□□□□ -0.48
NR4A1-215ENST00000550557 UNC5BQ8IZJ1 945 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 ACMSDQ8TDX5 336 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 RAB7BQ96AH8 199 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 VRTNQ9H8Y1 702 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 UGT1A7Q9HAW7 530 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 UGT1A10Q9HAW8 530 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 UGT1A8Q9HAW9 530 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 SSU72Q9NP77 194 aaKnown RBP12.06□□□□□ -0.48
NR4A1-215ENST00000550557 SNX15Q9NRS6 342 aa12.06□□□□□ -0.48
NR4A1-215ENST00000550557 CHURC1-FNTBB4DL54 471 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 GSC2O15499 205 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 KDELR3O43731 214 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 SLC25A12O75746 678 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 CNTN5O94779 1100 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 HGFP14210 728 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 VAC14Q08AM6 782 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 LSM12Q3MHD2 195 aaKnown RBP12.05□□□□□ -0.48
NR4A1-215ENST00000550557 GPAT3Q53EU6 434 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 C9orf64Q5T6V5 341 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 ZNF544Q6NX49 715 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 SLC9B2Q86UD5 537 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 PYDC1Q8WXC3 89 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 FCRL5Q96RD9 977 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 ADPRHL2Q9NX46 363 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 SUCOQ9UBS9 1254 aaKnown RBP12.05□□□□□ -0.48
NR4A1-215ENST00000550557 NR2F1P10589 423 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 MLLT3P42568 568 aaPredicted RBP12.05□□□□□ -0.48
NR4A1-215ENST00000550557 STXBP1P61764 594 aaKnown RBP12.05□□□□□ -0.48
NR4A1-215ENST00000550557 OC90Q02509 493 aaPredicted RBP12.05□□□□□ -0.48
NR4A1-215ENST00000550557 LMAN2Q12907 356 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 MLIPQ5VWP3 458 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 KIAA0408Q6ZU52 694 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 GATAD2AQ86YP4 633 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 KYQ8NBH2 561 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 MFSD3Q96ES6 412 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 SLX4Q8IY92 1834 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 TULP3O75386 442 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 TCF4P15884 667 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 FOXN2P32314 431 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 CHRNA4P43681 627 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 CLK1P49759 484 aaKnown RBP12.05□□□□□ -0.48
NR4A1-215ENST00000550557 BLVRAP53004 296 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 RALGPS1Q5JS13 557 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 CCNYL2Q5T2Q4 361 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 LYSMD3Q7Z3D4 306 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 VN1R5Q7Z5H4 357 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 TMEM174Q8WUU8 243 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 FIG4Q92562 907 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 CEP295NLQ96MC4 621 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 BTBD9Q96Q07 612 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 NPY6RQ99463 290 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 FETUBQ9UGM5 382 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 NENFQ9UMX5 172 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 KCNK6Q9Y257 313 aa12.05□□□□□ -0.48
NR4A1-215ENST00000550557 TRAFD1O14545 582 aaPredicted RBP12.04□□□□□ -0.48
NR4A1-215ENST00000550557 SCN2BO60939 215 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 MTX2O75431 263 aa12.04□□□□□ -0.48
NR4A1-215ENST00000550557 POP7O75817 140 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms